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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR021139
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.017s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0345639.1
n.a. Limkain-b1 [Medicago truncatula] gi|357511719|ref|XP_003626148.1| chr0 181314778 181315405 +
2 domain predictions
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Lj1g3v1255830.1
n.a. Limkain-b1 [Medicago truncatula] gi|357464505|ref|XP_003602534.1| chr1 15154668 15161375 -
2 domain predictions
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Lj1g3v4806340.1
n.a. Limkain-b1 [Medicago truncatula] gi|357511719|ref|XP_003626148.1| chr1 57912714 57916019 +
2 domain predictions
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Lj3g3v3326010.1
n.a. Zinc finger family protein [Theobroma cacao] gi|508777217|gb|EOY24473.1| chr3 40497670 40499572 -
2 domain predictions
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Lj3g3v3326020.1
n.a. Zinc finger family protein [Theobroma cacao] gi|508777217|gb|EOY24473.1| chr3 40498031 40499572 -
2 domain predictions
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LotjaGi1g1v0315300.1
n.a. Meiosis arrest female protein 1; TAIR: AT5G09840.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q9Y4F3|MARF1_HUMAN Meiosis arrest female protein 1; TrEMBL-Plants: tr|A0A1J7GRS8|A0A1J7GRS8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0315300 LjG1.1_chr1 76120313 76127099 -
2 domain predictions
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LotjaGi1g1v0751100.1
n.a. Meiosis arrest female protein 1; TAIR: AT3G62200.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|E1BZ85|MARF1_CHICK Meiosis arrest female protein 1 homolog; TrEMBL-Plants: tr|I1NBN1|I1NBN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0751100 LjG1.1_chr1 132337060 132343339 +
2 domain predictions
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LotjaGi3g1v0500700.1
n.a. Zinc finger family protein; TAIR: AT4G12240.1 zinc finger (C2H2 type) family protein; Swiss-Prot: sp|Q9HBE1|PATZ1_HUMAN POZ-, AT hook-, and zinc finger-containing protein 1; TrEMBL-Plants: tr|A0A0L9T4Z6|A0A0L9T4Z6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0500700 LjG1.1_chr3 91889196 91891741 -
2 domain predictions
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LotjaGi4g1v0075500.1
n.a. Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500 LjG1.1_chr4 9681925 9685300 +
2 domain predictions
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LotjaGi4g1v0075500.2
n.a. Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500 LjG1.1_chr4 9682020 9685337 +
2 domain predictions
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LotjaGi4g1v0075500.3
n.a. Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp|Q8BJ34|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr|I1JDZ7|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500 LjG1.1_chr4 9683335 9684924 +
2 domain predictions
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