Domain Predictions — View

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PF01936

Source: Pfam

Description

NYN domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0345639.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Limkain-b1 [Medicago truncatula] gi\|357511719\|ref\|XP_003626148.1\|	Domains G3DSA:3.40.50.1010 IPR021139 IPR024768 IPR029060 NON_CYTOPLASMIC_DOMAIN PF01936 PTHR14379 PTHR14379:SF7 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd10910	13
Lj1g3v1255830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Limkain-b1 [Medicago truncatula] gi\|357464505\|ref\|XP_003602534.1\|	Domains G3DSA:3.40.50.1010 IPR021139 IPR024768 IPR025605 IPR029060 PF01936 PF12872 PS51644 PTHR14379 PTHR14379:SF6 cd08824 cd10910 mobidb-lite	13
Lj1g3v4806340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Limkain-b1 [Medicago truncatula] gi\|357511719\|ref\|XP_003626148.1\|	Domains G3DSA:3.40.50.1010 IPR021139 IPR024768 IPR029060 PF01936 PTHR14379 PTHR14379:SF7 cd10910 mobidb-lite	9
Lj3g3v3326010.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger family protein [Theobroma cacao] gi\|508777217\|gb\|EOY24473.1\|	Domains G3DSA:3.40.50.1010 IPR007087 IPR021139 IPR029060 PF01936 PS00028 PS50157 PTHR35744 PTHR35744:SF2 SSF57667 cd06167 mobidb-lite	12
Lj3g3v3326020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger family protein [Theobroma cacao] gi\|508777217\|gb\|EOY24473.1\|	Domains G3DSA:3.40.50.1010 IPR007087 IPR021139 IPR029060 PF01936 PS00028 PS50157 PTHR35744 PTHR35744:SF2 SSF57667 cd06167 mobidb-lite	12
LotjaGi1g1v0315300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiosis arrest female protein 1; TAIR: AT5G09840.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp\|Q9Y4F3\|MARF1_HUMAN Meiosis arrest female protein 1; TrEMBL-Plants: tr\|A0A1J7GRS8\|A0A1J7GRS8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0315300	Domains G3DSA:1.10.10.1880 IPR021139 IPR024768 IPR025605 IPR041966 PF01936 PF12872 PS51644 PTHR14379 PTHR14379:SF6 cd08824 cd10910 mobidb-lite	13
LotjaGi1g1v0751100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiosis arrest female protein 1; TAIR: AT3G62200.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp\|E1BZ85\|MARF1_CHICK Meiosis arrest female protein 1 homolog; TrEMBL-Plants: tr\|I1NBN1\|I1NBN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0751100	Domains IPR021139 IPR024768 PF01936 PTHR14379 PTHR14379:SF7 cd10910 mobidb-lite	7
LotjaGi3g1v0500700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger family protein; TAIR: AT4G12240.1 zinc finger (C2H2 type) family protein; Swiss-Prot: sp\|Q9HBE1\|PATZ1_HUMAN POZ-, AT hook-, and zinc finger-containing protein 1; TrEMBL-Plants: tr\|A0A0L9T4Z6\|A0A0L9T4Z6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0500700	Domains G3DSA:3.40.50.1010 IPR013087 IPR021139 IPR036236 PF01936 PS00028 PS50157 PTHR35744 PTHR35744:SF4 SSF57667 cd18725 mobidb-lite	12
LotjaGi4g1v0075500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp\|Q8BJ34\|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr\|I1JDZ7\|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500	Domains G3DSA:1.10.10.1880 IPR021139 IPR024768 IPR025605 IPR041966 PF01936 PF12872 PS51644 PTHR14379 PTHR14379:SF3 cd08824 cd10910 mobidb-lite	13
LotjaGi4g1v0075500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp\|Q8BJ34\|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr\|I1JDZ7\|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500	Domains G3DSA:1.10.10.1880 IPR021139 IPR024768 IPR025605 IPR041966 PF01936 PF12872 PS51644 PTHR14379 PTHR14379:SF3 cd08824 cd10910 mobidb-lite	13
LotjaGi4g1v0075500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiosis arrest female protein 1-like protein; TAIR: AT2G15560.1 Putative endonuclease or glycosyl hydrolase; Swiss-Prot: sp\|Q8BJ34\|MARF1_MOUSE Meiosis arrest female protein 1; TrEMBL-Plants: tr\|I1JDZ7\|I1JDZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0075500	Domains G3DSA:1.10.10.1880 IPR021139 IPR024768 IPR025605 IPR041966 PF01936 PF12872 PS51644 PTHR14379 PTHR14379:SF3 cd08824 cd10910 mobidb-lite	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	9.09