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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1255830 |
| Transcript ID | Lj1g3v1255830.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Limkain-b1 [Medicago truncatula] gi|357464505|ref|XP_003602534.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 975 | 948 | 0 | ||
| PANTHER | 28 | 975 | 948 | 0 | – | |
| Gene3D | 51 | 195 | 145 | 1.30E-09 | ||
| Pfam | 58 | 193 | 136 | 4.40E-27 | ||
| CDD | 59 | 201 | 143 | 1.95E-54 | – | |
| ProSiteProfiles | 262 | 341 | 80 | 12.245 | ||
| CDD | 263 | 317 | 55 | 2.33E-08 | – | |
| Pfam | 264 | 316 | 53 | 2.90E-07 | ||
| MobiDBLite | 489 | 508 | 20 | – | – | |
| MobiDBLite | 591 | 611 | 21 | – | – | |
| ProSiteProfiles | 765 | 839 | 75 | 13.926 | ||
| CDD | 768 | 821 | 54 | 7.53E-12 | – | |
| Pfam | 770 | 824 | 55 | 2.90E-08 | ||
| MobiDBLite | 855 | 901 | 47 | – | – | |
| MobiDBLite | 981 | 1009 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. |
Expression pattern of Lj1g3v1255830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1255830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.