Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | Lj0g3v0345639 |
| Transcript ID | Lj0g3v0345639.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Limkain-b1 [Medicago truncatula] gi|357511719|ref|XP_003626148.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| CDD | 20 | 86 | 67 | 5.10E-22 | – | |
| Phobius | 20 | 151 | 132 | – | – | |
| PANTHER | 22 | 133 | 112 | 1.90E-32 | ||
| Pfam | 22 | 81 | 60 | 3.50E-10 | ||
| PANTHER | 22 | 133 | 112 | 1.90E-32 | – | |
| Gene3D | 22 | 84 | 63 | 6.90E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. |
Expression pattern of Lj0g3v0345639.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…
A list of the top 25 highly co-expressed genes of Lj0g3v0345639.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.