Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027105
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.773s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3765010.1
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X2 [Cicer arietinum] gi|502100538|ref|XP_004491744.1| chr1 43147820 43149713 -
2 domain predictions
3 GO terms
Lj1g3v3765010.2
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1 [Cicer arietinum] gi|502100534|ref|XP_004491743.1| chr1 43148798 43149654 -
2 domain predictions
3 GO terms
Lj3g3v3374690.1
n.a. PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine max] gi|356571467|ref|XP_003553898.1| chr3 41484478 41485768 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.1
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116573724 116583882 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.2
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|I1MLN7|I1MLN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116582133 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.3
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116583635 -
2 domain predictions
3 GO terms
LotjaGi1g1v0618800.4
n.a. U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800 LjG1.1_chr1 116574241 116583780 -
2 domain predictions
3 GO terms