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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PS00598
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0041269.1
n.a. PREDICTED: chromo domain-containing protein LHP1-like [Glycine max] gi|356560656|ref|XP_003548606.1| chr0 13536996 13542944 +
2 domain predictions
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Lj1g3v1290440.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| chr1 15425089 15431773 -
2 domain predictions
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Lj2g3v1646590.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356540854|ref|XP_003538899.1| chr2 25636629 25641052 +
2 domain predictions
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Lj2g3v1646590.2
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356495335|ref|XP_003516534.1| chr2 25636629 25642737 +
2 domain predictions
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LotjaGi2g1v0224800.1
n.a. Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800 LjG1.1_chr2 68096866 68105831 -
2 domain predictions
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LotjaGi2g1v0356800.1
n.a. Cytosine-specific methyltransferase; TAIR: AT1G80740.1 chromomethylase 1; Swiss-Prot: sp|C0SQ89|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|I1J8E3|I1J8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356800 LjG1.1_chr2 83309833 83316196 +
2 domain predictions
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LotjaGi3g1v0259700.1
n.a. Chromo domain-containing protein LHP1; TAIR: AT5G17690.1 like heterochromatin protein (LHP1); Swiss-Prot: sp|Q946J8|LHP1_ARATH Chromo domain-containing protein LHP1; TrEMBL-Plants: tr|A0A0R0FVG1|A0A0R0FVG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0259700 LjG1.1_chr3 47421815 47428561 +
2 domain predictions
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LotjaGi4g1v0407700.1
n.a. Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0407700 LjG1.1_chr4 78375667 78384598 +
2 domain predictions
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