Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0224800 |
| Transcript ID | LotjaGi2g1v0224800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68096866..68105831) extracted from Lotus japonicus Gifu genome v1.2.
CGAGATCAGGGGTTGATGACCTAGATTCTTCTTCCCCCTTTTTTCCAGATTTTCACCTCCCTTAAACCCTTCGCCGCACA CCTTCTTTCATTTCTTCAATTTTCTCTAGTGTCGCGGATCTGGCAATCAAATGCCTTGCACCAGCTGATAGAAAAAGTTG GCGGTGAGTTTCGATTCTTAGTCTTTTATTTATTTGTAATGCATGTCATGTTATTCCATACTTTGACATCCATGGATGAA AATTGTTGCATACATTTTCCATCAAATTAGTGTGTAGACATTAAGATTTATGACGATGAGTCCAATACATGGTAATTGAA AACCCTAGTCTAGATCTGTGCACAAGTTACCTGGAAAACCCTAATCATTATGATTTGGGAATATTTTCCAACTTCCTGAT TTCTATTCACCGATGCCTAAATTTCCTGTAAGCATAATCAACTTATTTCTCTCGTAGTTGTTAATACTGATCATGCATGC TCTCCATAGATGTGAACAAGGACCAAAGTAGTATTTCAAATATGAACATTTTTGCAATCACATTACATATTTCATGAGAA TTATATTCAATTACACATGTTAGGGTCAATAGATCATATGTTTTTTTAGGATCCGAAACCTCTCCAGCCAACTCTCCAAC ACCTATCACGCAAAATATCAGCCATAGATCTTACAACTAAGGGATAAAAAAACTATAAAACCAATTGGTCATCTTAAACG TGAAATCGGTCGAGGTGAGAGGCTGCACGGCTGGAGGGCCGGAGAGGATCCCAATTCATTTTTTTTCAGGCCATTCTATC ACAAGATAGGGCCAACAAGTAAAGCCTAGCCCAATTGAAGAAACCCAAAACCCATGCACCAATAGAAGCAACGTTTGGCT AAATTGGCAAATAGTGCGAAGAGGCGCATTCTTTCAAACTTACAGTGCCTTCTATAAATACCGATTTCTCCTTCTCTTCT CCTAACTACTTTTTCCTCCAATTCGCAGCACCATCCTCCTCTGCAGCAATGCCTAGAAAGCGCAAAATCCGCACACTCTC CTCCTCCGTTGTCGCCACCACAGGTGCTTCCTCCGGCGAGCCTCTGAACAATTCAAGGAGAAAGGCGAATCCGAAGAGTC TTGCAGGTGAAGCAACTTCCTCTTCCGTTGAAAAGAAGCAAGTATGGAAGTCCAACCCTACTGTCATCACTCTTGACGAC AGTGAGAGTGAGAGTGAAGGAAGTATCTCTAGGTTCATCGGAGATCCTGTCCCTGATGAGGAAGCAAGACAGCGATGGCC TCAACGATACCGCCAGAAGGTAACTTTGTGTTAATAGTCTCTTTTGATTGATTCATATAATTATAGCTACAACTGATATT TAATATTGATTTATTCTTAGATTTTGAAACAGAAGCAATTTGCTAAGTCAAAGTCAAACAGGTACATTTCAACTTTTGAA AATTATACTTTGATGTTATATTATCAGTAAATATTTGTAATGTTCTATTGACGTTGTTCGTATGCCTTTCATTAGTGATG ATGATATTCTCCAAGCTCGTCGGCATTACACTGAGGCAGAAGTAGATGGGTCGATTTACAGTCTTTACTATGATGCCCAT GTAAAAGTGAGTTAATAGAGTAATGATTCATTCACATCAACGTTATCTTTCATCTCATTTCCCCTCACTTTTTTCCTCTC TCTCTCTTTGCATTTTTATCACATCACCAATCATATCACTTATATTTTCCTATCTTCTCTTCTTATCTCACTCTAGGAAT GAGTGTAATTAAAATGTCAATGTGTTGGAGTATATTGATATTATACTCCTAATGTACAAGTTTGGGTTTTGGGGTTCTGT TAGGTTGTTGTTGTAACAGTTTGTAAGTGCACATGGGTAGTTAGGATTGTGTTACTTATATATAGTTAGCTTTGTTATAC ATTCTTTAGGTTAATGATAATTCTGATTCAATTCATGACCTCAAAATCTCAATCTCTCTCTCTCTCTCTCTATATATATA TATATATATATATATATATATTTTGAATTTATCATAATGAAGTATTTGAGTTCATATATGTTTACTACTTGATTTGATTA ACACTCAAAGCATACCCCTTTTATGTATATGCTTGAAATTTGTTTTGTGCTCCCCGTTAATGTATTTTGTTTGCTAACTC CAAGGATGTGTTTGGTTCCCTTTTTATATTCAGGCAGAGGAAGGAGCTGACAACTACATTTGTAAAATTGTTGAGATGTT TGAGGCATTTGATGGGACCTTACATTTCACCGCACAATGGTATTATAGAGCAAGGGATACTGTAAGTTTTATTATGTTAC TTTGTTTGTAAATGTTATATGTAATTCAACAAAAGTAATTATCAGGCAGAAGTTTGAATAGTTTAATGCTTTGTCTACTT TTCAGGTCATTAAAAACCTTGCGTACTTGATTGAAGAACCAAAGCGGGTTTTTTATTCAGAAGTTCAAAATGACAATCCA TTGGATTGTCTTGTTGAAAAGCTGAACATTTCCAGAGTGTCACTAAATGTATGTTAGCATGTTAAGTCTTTAGTTTTCTA TTATAATTAATGTTGTTGTATTTCTTTAATTTGTAATAATTAAGTTTTATTCCAGTTGGATTTGGCTGCGAAGGAAAAAA CAATTCCACCATGTGATTACTATTGTGATGCACAATATGACTTGGTGTACACTTCATTTATTAAATTTCCAACAGGTTTT ATTTTATTTTTGGTCTTTTTTTTGTTCTCTATTTTTTTTAATTGAGTCTCATACAAACTTGTAATTCAGAAAGCAACGAA ACTGGTAGTGATATTTCATCAACAATATCTTCTGAAACTGATGTAACTAGAAGATCTGATGCGAACTCTCAACATAAGGA TGCTGTCAATTGTGAAGAAAATAAAAGTTCTGAGCTGAAGTTGCTTGACTTGTACTCTGGTTGTGGAGCAATGTCAACTG GTTTATGCCTCGGTGGAACCTTGTCCGGTTCAAACATTGTCACTGTGAGTTCTGCGCTTCTTTGACATGTAGGAATGTAA CCCATTGATTCTGTTTTGCTTTGGTGTTTTGTTAACCATTTTTTTATTTGAATAGAGATGGGCAGTAGACTTGAATGAAC ATGCTTGTGCAAGTCTTAAATTAAACCATCCTGAAACTGAGGTAATTGTCTGTGCCTTTGTTTATGATTTTTTTTTGAAG CATTAGCATTTATTTGAAATAATATTGTATGTAAATGTTGAATTCCTCTACTTTTTACACTTCTGATCAGGTTAGAAATG AACCTGCAAAAAGTTTCCTCGCATTATTAAAGGAATGGGAGAAGCTATGTAGTTACTTCTCTTTAGTCCAAAACAAGGTG CCACATGAGCAGTATGTGGATCTTTTTAGGGCAGCAGAGGATGATGACACTGGAAGTGTAGAAAGTAGTGAGGAAGAGGA CGATGAACTGTTTGAAGTTTCAGAATTGCTTGCCATACGCTATGGTGATCCAAATGGGAAAAAAGAGCAAGGTTTATACT TTAAGGTAGTCAATGTTCGACTTCTGTCTATTTTTTCCACTGAATGCTACCTTTATTAGTTATTTCTCAACCTTGTGTTT TACTTTTTGCTTAATACAATTATTTTCATTGTTTTTGCTTTCTTTATATTCATTTTAGGTTCGTTGGAAGGGTTATGGAT CTGATGCAGACTCTTGGGAGCCAATTAATGGTTTAAGGTAAGCTACAATCATTGTTGCAAATGACTATTCATTGCAGCAA GTGAAAAACGTAATTAGTAATGTATTCTTTATGCTTCCCCATGGTTAAATTTTTTCCACATGACAACATCGACTAATTTG TAGTGTAGTTACATTTGATTGAAATTCTCTTACATGATTAGTAGTGGCGTCTTTTGTTTGTTTAATCTTTTACTGATTAA ATATTCTCTTCTCAATAGTAATTGCAAGGAAACAATAAAGAATTTTGTCATTCAAGGCTTCAAGTTGAATACCTTGCCTT TGCCTGTAAGTTGCTATTGATTTTGATATAATGTCCTTGAAATTATATCATGTGGTTAACTATTCTAACACCCAATGAAT TCAGGGTGATGTTGATGTAATATGTGGTGGACCTCCTTGCCAAGGTATTAGTGGTTTCAACCGCTTCCGAAACAAAGATC ACCCATTGGAGGATGAGAAGAACCAACAACTAGTGGTTTACATGGATATTGTTCAATATCTTAAGCCCAAATTTGTTTTG ATGGAAAATGTAGTTGATATTGTAAAATTCGCAAATGGTTTTCTTGGAAGATATGCTTTGGGCCGTCTTCTTCAAATGAA TTATCAAAGTAGCTTGGGAATTATGGCCGCTGGAGCTTATGGGCTTCCTCAGTTTCGCTTGCGTGTCTTCATTTGGGGGG CAGCACCTTCAGAGGTATTTGATTAATTTTATCTGTGGCAATTGTTTCTGCCTAAACTTCTTGAAGTATTTGTTTGTCTT TTAGCTTGCATCTTATCAAATTTATTATTATTCAGTTTTTTCTCTTAGCTATTCATCTTTTTTGTGAAGTGTATTTGGTT TAATGTTGGTGTTGGATTGCATGTTGATTTAGAAAGTGTATAGTTAATGATTTAGTAAAGATGTTAGCAAGTTCATCCCT GGAGCAAACATGACACATTTTGATATTCTCTATGTTCCGAGAAATGACATAATTGATACCTCAATTAGTTTTTGGCAGTA CTAACTAGTTGCTTTGTGTAGTTGGTAGTTGCATTAAATAGCTCACTTAGGGCTGAATTGATCAAGCAGTTGATTGGTTT ATTTACATTTTATGCTAATTCAGTTAAACAAAATAGTTTTGTTGAATATTTTTAGTTTTAAATTAAATTGTATTTCTTTA TGAACTGCAGAAGCTTCCTCAATTTCCACTTCCAACACATGATGTTATAGTAAGAGGTGTCATTCCTGTGGAGTTTGAGG TATGAGTAAATGAATATAATGTCTTCAACCTGATATTTTTATTGGAGTACTACTAGATGAGTTGTAATAGAAAAGCATGT CATTTTACATCTGTGTATGTTGACATAAAAGTAGTGTGGGTGGCATGGAATCTGAATGATAAAGTGTGAAATTAAAACTG TTAAAATTTTAACTTCATAGTATGTTATACTTGCATATATATATCTTGAATTTTTTTCTTTAAAGTGCACTCTTCTCCTC TGATGAGATAAATCTAGATGGCATAATTTGAGAGTGGATGCACCTGAAATGAAGCTTATAAATTATAGACTTAGAATCTA GTAGTTAAAATTATATTTTAGTTGTGAGGTCCCACTCTTGTTCTATGATTGATTCTTTCAATTCATTGTTAACAGTTATT GATTATGTAATGTATATTTGTAATTTTAGTACACCTCAATTGTTTGTTTACCTTTAAATGTAATGGTTAATTGTTGGGTT AAACAACTATATCCCTTCAACATCCTTCAAAATCTTAATTAGTTGTACTTTTTAAGAAATAGTTCTTTTAAACCTAACTT GAAGCCATGATCCCTAGGGACATTCATTGTTTGTCTATTAAAGATTTTGGTCCAAGATTGGATATAAAGGGTATAAAAAA TGCATGCAGATAAACACAGTTGCATTTAATGAAGGGCATAATGAGCCGTTGCAAAGAATACTTTTGTTGGAAGACGCTAT TTCTGACCTTCCTCCGGTATTTGTTCATTTTGTTATGACTGTTGTGGCTATTTCTTTTTTTTTCTTTCTTCCTCTTTAGA TTTTTTTTGGTCAGCTTACCATGATAAATTTTATTTTGTGAATGTATTCAGATTGAGAATGATGAAAGACGGGATGAGAT GCAATATGACAAACCTCCCCAGACTGAGTTTCAGAAATTTATTAGATTGAGCAAAAATGGTAACATATTATTAAAGTTTA TGCTTTTTGGATGTAAATCATTTGTGTGCTTGTGATTGAAAAGTTATATTTTTGGAAGAATTGTTTAAATTGAGACTTAT CAACAATTTGATAAATTGTGTGGTTAAGCTTGTTGGTTTGATATGCTTTTTAATTTTTTAACCTATGTTTGTTTCATACA CATCAATATTAATGCTAACAATCTTCCTCTACTAACATTTCATTGGGACCTGCCAAACTAAGTGGTTTGTAATTTGGTTA ATAAATCTGCAGAAATGTTAGGTATTTCGTCTGGAAAAAGTTCAAAGTCCATACTTCATGATCACCGTCCACTAAAATTA AATGTGGATGATTATCAACGTGTGTGTCGAATCCCTAAAAAGAAGGTTTTTGTTGATCATTTTTGCTTTTATTTGCTGCA AAATAAGGTTCTTATCTCATGGTTTTAAATTTATTTGTTATTAATGATTTTTTTTGTTGTTCTTAGGGTGGATGCTTCAG AGATTTACCTGGTGTTCGTGTGCGACCAGATAATAAGGTTGAATGGGATCCTAATGTAGGACGAGTTTATTTGGATTCAG GAAAACCATTGGTAATAAGTCTTTTCAACATATATTTCTTCTAGTTTCTCTTTTTGTAACTATATTTTTAAGTGGATGAA GAGTATCCTAGAAATTTAGGTGTAGTCTACGGTGATAATGAGTGATTTGGCTTCTTTAAATTGAATGTTTTGTAGACTGA ATTACATAACTGAAATTCGGAAATATCTCAATGTTATGTTTGGAATAACTTTGGTTATTACATGGCCTTAAAAGAAATTG TGGCCTCAGGCTCAGCACCATACATATTAAAATAAACTACCACATGACCCCTTAACTCATACACTAAATGAAACTCTAAA AATCAACCTCAGATCCCCTGCCTTAATTTCATGTTTTTAAGTGTTCAATTTTTTAATAAACTTACTAATTATCACCTTAC ACTTCTTTTTTGATTGTTGGCTTAGGTTCCTAATTATGCCATGTCTTTTGTGGACGGAACGTCATCAAAGTAAGCAATTC ACCAAGAATGAAAATTATAGCTTAATATTCTAATTTTGTAATGGATGCTTGTATTTATGTTCTTCCATTAAGTTACTTTG GTAATGCTTTACGCTCATATTTCCAGACCTTTTGCTCGGTTATGGTGGGATGAAACTGTTCCAACTGTTGTGACTAGAGC AGAACCTCATCATCAGGTACACTTTTCGTAATTTAAAATCTTTGGTAGGGTTCTATGGAGAATGATCTATCGCATGTTAT TTTGTTTGTAGAATTTTAAGAGAATGTAAATGATGTCGATTCAGCATAATACACATTCTGTATTAAGAGAACATATAATA GGTATGTTTGGTTTGTTAGAATATAATATAAAACTATTCATGTGGCCCTTACCCAACAACTTAAGATTTTGAGATATGTG TTTACTTGACATGATATCAGAGTTTCTATGGCCGAGAGGTCTAGAGTTCGATCCTTGCTTCGCTCACTTTTTAATTAAAA ATGGAATTTAATTAAGCACATGTTAGGTGGACCCAATGACGGATCCAGAAATTTTATGTTGTGGGGGCAATATGCGCATA AAATTTTCAAGCAGAAAAAATATAACATATAACTATTAAAAAGTTTGATAGAATAAAAGATAAACGCCCCAATAAAATTT TAAATATTCACTATTCAATTAGTTTCAGAATATTAGAAATATAAATATGTGAATATTATTAATTTATTTTATTATATGTT TACGAACATTCTTCGCATGAGTAATTTTTAAGCATGTATCACTTTAACTAACCACCTATTGATATTATCAATTTATAAAA CACTATAGCACTTAAGAAAATCACCAAAAGACAATAAAAAACAAACTAGAAACCAGTACCCATTTTTAAAGTGTAACCAA ACAAAAAAAACTCAGGACCCATTGACCATTGTCATTTGTCATGGTTTATTCACATTAATTGGCAATTCCAGCCTCTTCTA TACAGTGGACAAGCAAAATGTAGTGGATCAACACAACAAAAGTTGATATTTCAATGGCACTAGAGGTAAAATTGACAAGG TACGGGGGCATTCATTAAATACGTGGGGGCATTTTAATGTTTTAATCATATTTTATGTTATAGTATCAAGTACATGTAAA AAAGACGTGGGGTCATTTGCCCCATTTGCTAGCAACGTGGGTCCGTCCCTGGGTGGACCTGTGCATTTATCCACGCTTCA AGCCCAGAGGGCTCTTGCGTGAGAGGTTAAGCTTTTGAGTTAAGTGGTTACTGGACATGTTCCACAATAAGATCCATGGG TAGATCAGTAGATGATATGAAGGATGCTTGCTTTCATTTGGATCCATTAGACTTTCAACATAACATTTGTCTCCACATAA CTTTCTATATTTTTTTAGTGGAGAACGCGTCCTATTGAGTTAAGTGAAGTATGAAAAACCAATTTTAAATGTATATGTAA CCTATCAGATATGTATGTTTTATCAGGCAATTATGCATCCAGAGCAAGATCGGGTTTTGTCAATTCGTGAAAATGCAAGA CTTCAAGGTTTTCCTGACTACTATAAGCTATGTGGGCCGGTTAAAGAAAGGTAACTCTAGTGTTTCTTATCTTCTATTCA TACAATTTATATTCATGAAAATCATTTTCTTATGACCGTTTGATATGGGTTTAGGTACATTCAAGTTGGGAATGCAGTTG CAGTTCCAGTGGCTCGAGCCTTAGGATTTACTTTAGGACTTGCCTTTCAAGGTTTAGTTGGTGAAGGACCACTCTATAAA TTGGATGAGAAATTTCCCATGCTTAGGGAAGCTTCTTCCGAGTTAGAAGACAATTCGTAATGTAACATGAATTTTCATTT GTGTATGGACAAGTACAATTTATTATGTTTCGTCATGTATTCGTAAGTTGTATGATCATTGATTGAAAACATTGTGATGT ATTATTACATTTATTGTTTGGGATGCAGATGTTCTGGCTCTGTCTCAACTTGAAATTAAACATTATTGATAAAAAACTTT GGGATG
CDS sequence (LotjaGi2g1v0224800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTAGAAAGCGCAAAATCCGCACACTCTCCTCCTCCGTTGTCGCCACCACAGGTGCTTCCTCCGGCGAGCCTCTGAA CAATTCAAGGAGAAAGGCGAATCCGAAGAGTCTTGCAGGTGAAGCAACTTCCTCTTCCGTTGAAAAGAAGCAAGTATGGA AGTCCAACCCTACTGTCATCACTCTTGACGACAGTGAGAGTGAGAGTGAAGGAAGTATCTCTAGGTTCATCGGAGATCCT GTCCCTGATGAGGAAGCAAGACAGCGATGGCCTCAACGATACCGCCAGAAGATTTTGAAACAGAAGCAATTTGCTAAGTC AAAGTCAAACAGTGATGATGATATTCTCCAAGCTCGTCGGCATTACACTGAGGCAGAAGTAGATGGGTCGATTTACAGTC TTTACTATGATGCCCATGTAAAAGCAGAGGAAGGAGCTGACAACTACATTTGTAAAATTGTTGAGATGTTTGAGGCATTT GATGGGACCTTACATTTCACCGCACAATGGTATTATAGAGCAAGGGATACTGTCATTAAAAACCTTGCGTACTTGATTGA AGAACCAAAGCGGGTTTTTTATTCAGAAGTTCAAAATGACAATCCATTGGATTGTCTTGTTGAAAAGCTGAACATTTCCA GAGTGTCACTAAATTTGGATTTGGCTGCGAAGGAAAAAACAATTCCACCATGTGATTACTATTGTGATGCACAATATGAC TTGGTGTACACTTCATTTATTAAATTTCCAACAGAAAGCAACGAAACTGGTAGTGATATTTCATCAACAATATCTTCTGA AACTGATGTAACTAGAAGATCTGATGCGAACTCTCAACATAAGGATGCTGTCAATTGTGAAGAAAATAAAAGTTCTGAGC TGAAGTTGCTTGACTTGTACTCTGGTTGTGGAGCAATGTCAACTGGTTTATGCCTCGGTGGAACCTTGTCCGGTTCAAAC ATTGTCACTAGATGGGCAGTAGACTTGAATGAACATGCTTGTGCAAGTCTTAAATTAAACCATCCTGAAACTGAGGTTAG AAATGAACCTGCAAAAAGTTTCCTCGCATTATTAAAGGAATGGGAGAAGCTATGTAGTTACTTCTCTTTAGTCCAAAACA AGGTGCCACATGAGCAGTATGTGGATCTTTTTAGGGCAGCAGAGGATGATGACACTGGAAGTGTAGAAAGTAGTGAGGAA GAGGACGATGAACTGTTTGAAGTTTCAGAATTGCTTGCCATACGCTATGGTGATCCAAATGGGAAAAAAGAGCAAGGTTT ATACTTTAAGGTTCGTTGGAAGGGTTATGGATCTGATGCAGACTCTTGGGAGCCAATTAATGGTTTAAGTAATTGCAAGG AAACAATAAAGAATTTTGTCATTCAAGGCTTCAAGTTGAATACCTTGCCTTTGCCTGGTGATGTTGATGTAATATGTGGT GGACCTCCTTGCCAAGGTATTAGTGGTTTCAACCGCTTCCGAAACAAAGATCACCCATTGGAGGATGAGAAGAACCAACA ACTAGTGGTTTACATGGATATTGTTCAATATCTTAAGCCCAAATTTGTTTTGATGGAAAATGTAGTTGATATTGTAAAAT TCGCAAATGGTTTTCTTGGAAGATATGCTTTGGGCCGTCTTCTTCAAATGAATTATCAAAGTAGCTTGGGAATTATGGCC GCTGGAGCTTATGGGCTTCCTCAGTTTCGCTTGCGTGTCTTCATTTGGGGGGCAGCACCTTCAGAGAAGCTTCCTCAATT TCCACTTCCAACACATGATGTTATAGTAAGAGGTGTCATTCCTGTGGAGTTTGAGATAAACACAGTTGCATTTAATGAAG GGCATAATGAGCCGTTGCAAAGAATACTTTTGTTGGAAGACGCTATTTCTGACCTTCCTCCGATTGAGAATGATGAAAGA CGGGATGAGATGCAATATGACAAACCTCCCCAGACTGAGTTTCAGAAATTTATTAGATTGAGCAAAAATGAAATGTTAGG TATTTCGTCTGGAAAAAGTTCAAAGTCCATACTTCATGATCACCGTCCACTAAAATTAAATGTGGATGATTATCAACGTG TGTGTCGAATCCCTAAAAAGAAGGGTGGATGCTTCAGAGATTTACCTGGTGTTCGTGTGCGACCAGATAATAAGGTTGAA TGGGATCCTAATGTAGGACGAGTTTATTTGGATTCAGGAAAACCATTGGTTCCTAATTATGCCATGTCTTTTGTGGACGG AACGTCATCAAAACCTTTTGCTCGGTTATGGTGGGATGAAACTGTTCCAACTGTTGTGACTAGAGCAGAACCTCATCATC AGGCAATTATGCATCCAGAGCAAGATCGGGTTTTGTCAATTCGTGAAAATGCAAGACTTCAAGGTTTTCCTGACTACTAT AAGCTATGTGGGCCGGTTAAAGAAAGGTACATTCAAGTTGGGAATGCAGTTGCAGTTCCAGTGGCTCGAGCCTTAGGATT TACTTTAGGACTTGCCTTTCAAGGTTTAGTTGGTGAAGGACCACTCTATAAATTGGATGAGAAATTTCCCATGCTTAGGG AAGCTTCTTCCGAGTTAGAAGACAATTCGTAA
Protein sequence (LotjaGi2g1v0224800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPRKRKIRTLSSSVVATTGASSGEPLNNSRRKANPKSLAGEATSSSVEKKQVWKSNPTVITLDDSESESEGSISRFIGDP VPDEEARQRWPQRYRQKILKQKQFAKSKSNSDDDILQARRHYTEAEVDGSIYSLYYDAHVKAEEGADNYICKIVEMFEAF DGTLHFTAQWYYRARDTVIKNLAYLIEEPKRVFYSEVQNDNPLDCLVEKLNISRVSLNLDLAAKEKTIPPCDYYCDAQYD LVYTSFIKFPTESNETGSDISSTISSETDVTRRSDANSQHKDAVNCEENKSSELKLLDLYSGCGAMSTGLCLGGTLSGSN IVTRWAVDLNEHACASLKLNHPETEVRNEPAKSFLALLKEWEKLCSYFSLVQNKVPHEQYVDLFRAAEDDDTGSVESSEE EDDELFEVSELLAIRYGDPNGKKEQGLYFKVRWKGYGSDADSWEPINGLSNCKETIKNFVIQGFKLNTLPLPGDVDVICG GPPCQGISGFNRFRNKDHPLEDEKNQQLVVYMDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMA AGAYGLPQFRLRVFIWGAAPSEKLPQFPLPTHDVIVRGVIPVEFEINTVAFNEGHNEPLQRILLLEDAISDLPPIENDER RDEMQYDKPPQTEFQKFIRLSKNEMLGISSGKSSKSILHDHRPLKLNVDDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVE WDPNVGRVYLDSGKPLVPNYAMSFVDGTSSKPFARLWWDETVPTVVTRAEPHHQAIMHPEQDRVLSIRENARLQGFPDYY KLCGPVKERYIQVGNAVAVPVARALGFTLGLAFQGLVGEGPLYKLDEKFPMLREASSELEDNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| MobiDBLite | 1 | 89 | 89 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 33 | 33 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| MobiDBLite | 10 | 67 | 58 | - | – | |
| Phobius | 10 | 18 | 9 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 863 | 840 | - | – | |
| PANTHER | 41 | 861 | 821 | 0.0 | – | |
| PANTHER | 41 | 861 | 821 | 0.0 | – | |
| Gene3D | 70 | 235 | 166 | 3.8E-47 | ||
| SMART | 123 | 250 | 128 | 2.8E-14 | ||
| ProSiteProfiles | 130 | 250 | 121 | 15.731 | ||
| Pfam | 145 | 249 | 105 | 1.9E-7 | ||
| MobiDBLite | 258 | 272 | 15 | - | – | |
| MobiDBLite | 258 | 284 | 27 | - | – | |
| Gene3D | 270 | 386 | 117 | 3.5E-15 | – | |
| SUPERFAMILY | 293 | 829 | 537 | 2.0E-76 | ||
| ProSiteProfiles | 294 | 836 | 543 | 44.655 | ||
| PRINTS | 295 | 311 | 17 | 6.4E-12 | ||
| SUPERFAMILY | 397 | 460 | 64 | 6.6E-12 | ||
| SMART | 405 | 464 | 60 | 6.3E-6 | ||
| Pfam | 406 | 459 | 54 | 1.2E-8 | ||
| ProSiteProfiles | 406 | 459 | 54 | 11.761 | ||
| CDD | 406 | 461 | 56 | 1.22109E-27 | – | |
| Gene3D | 410 | 845 | 436 | 7.7E-218 | – | |
| ProSitePatterns | 429 | 449 | 21 | - | ||
| Pfam | 470 | 826 | 357 | 1.7E-35 | ||
| TIGRFAM | 473 | 825 | 353 | 5.0E-31 | ||
| ProSitePatterns | 476 | 488 | 13 | - | ||
| PRINTS | 519 | 533 | 15 | 6.4E-12 | ||
| PRINTS | 565 | 578 | 14 | 6.4E-12 | ||
| Gene3D | 624 | 795 | 172 | 7.7E-218 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chromatin binding | Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0224800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…