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IPR001330 is a PFTB repeat.
<p>This repeat is found in a number of proteins, including prenyltransferase subunit beta and geranylgeranyl transferase subunit beta.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: geranylgeranyl transferase type-1 subunit beta-like isoform X1 [Cicer arietinum] gi|502102591|ref|XP_004492125.1| | 7 | ||
| – | PREDICTED: protein farnesyltransferase subunit beta-like [Cicer arietinum] gi|502090610|ref|XP_004489283.1| | 9 | ||
| – | PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cicer arietinum] gi|502140826|ref|XP_004504351.1| | 9 | ||
| – | PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cicer arietinum] gi|502140826|ref|XP_004504351.1| | 9 | ||
| – | PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cicer arietinum] gi|502140826|ref|XP_004504351.1| | 9 | ||
| – | Geranylgeranyl transferase type-1 subunit beta; TAIR: AT2G39550.1 Prenyltransferase family protein; Swiss-Prot: sp|O80642|PGT1_ARATH Geranylgeranyl transferase type-1 subunit beta; TrEMBL-Plants: tr|I3T2B9|I3T2B9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0538700 | 9 | ||
| – | Farnesyl-protein transferase beta subunit; TAIR: AT5G40280.1 Prenyltransferase family protein; Swiss-Prot: sp|Q04903|FNTB_PEA Protein farnesyltransferase subunit beta; TrEMBL-Plants: tr|I1KCJ9|I1KCJ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0247100 | 9 | ||
| – | Geranylgeranyl transferase type-2 subunit beta; TAIR: AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1; Swiss-Prot: sp|Q84J75|PGTB1_ARATH Geranylgeranyl transferase type-2 subunit beta 1; TrEMBL-Plants: tr|A0A0B2SUM0|A0A0B2SUM0_GLYSO Geranylgeranyl transferase type-2 subunit beta; Found in the gene: LotjaGi4g1v0372600 | 9 | ||
| – | Geranylgeranyl transferase type-2 subunit beta; TAIR: AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1; Swiss-Prot: sp|Q84J75|PGTB1_ARATH Geranylgeranyl transferase type-2 subunit beta 1; TrEMBL-Plants: tr|A0A0B2SUM0|A0A0B2SUM0_GLYSO Geranylgeranyl transferase type-2 subunit beta; Found in the gene: LotjaGi4g1v0379700 | 9 | ||
| – | Geranylgeranyl transferase type-2 subunit beta; TAIR: AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1; Swiss-Prot: sp|Q84J75|PGTB1_ARATH Geranylgeranyl transferase type-2 subunit beta 1; TrEMBL-Plants: tr|A0A0B2SUM0|A0A0B2SUM0_GLYSO Geranylgeranyl transferase type-2 subunit beta; Found in the gene: LotjaGi4g1v0379700 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd02894 | CDD | 1 | 10.00 |