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IPR004860 is a Homing endonuclease, LAGLIDADG.
<p>Homing endonucleases (HEnases) form a large and highly diverse class of proteins encoded by introns and inteins that confer mobility to their host genetic elements. LAGLIDADG HEnases are structured into two tandemly repeated homing endonuclease-like domains [[cite:PUB00044539], [cite:PUB00075472]]. This entry represents the homing endonuclease LAGLIDADG domain [[cite:PUB00004482]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like isoform X1 [Cicer arietinum] gi|502126430|ref|XP_004499305.1| | 13 | ||
– | Pentatricopeptide repeat-containing protein family; TAIR: AT2G15820.1 endonuclease; Swiss-Prot: sp|Q9XIL5|PP154_ARATH Pentatricopeptide repeat-containing protein At2g15820, chloroplastic; TrEMBL-Plants: tr|A0A072VEK1|A0A072VEK1_MEDTR PPR containing plant-like protein; Found in the gene: LotjaGi2g1v0008500 | 13 | ||
– | Pentatricopeptide repeat-containing protein family; TAIR: AT2G15820.1 endonuclease; Swiss-Prot: sp|Q9XIL5|PP154_ARATH Pentatricopeptide repeat-containing protein At2g15820, chloroplastic; TrEMBL-Plants: tr|A0A072VEK1|A0A072VEK1_MEDTR PPR containing plant-like protein; Found in the gene: LotjaGi2g1v0008500 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
TIGR00756 | TIGRFAM | 1 | 33.33 |