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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0008500 |
| Transcript ID | LotjaGi2g1v0008500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT2G15820.1 endonuclease; Swiss-Prot: sp|Q9XIL5|PP154_ARATH Pentatricopeptide repeat-containing protein At2g15820, chloroplastic; TrEMBL-Plants: tr|A0A072VEK1|A0A072VEK1_MEDTR PPR containing plant-like protein; Found in the gene: LotjaGi2g1v0008500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:2828590..2837451) extracted from Lotus japonicus Gifu genome v1.2.
TCCTATTTTACCATTTGAAGTGTATTTTTATATCTCTCCATCACCATTTTGTTCAACCATAACCACAAAGCCAACAAAGA AAACGTCAGTAAAACCTCTTGAAGAGGATGTTATTTTTGGGGTCAATAAAGCCCAAGTATCTCCTCCAATTATTACATAG AGAGAACATGGTGGTGAGACTCACAGGCCAAGAGCTTCTTCTTCCATTTCAACTCCCTCCTCTTTCTCGCAACACACTCT CAAACCCTAAATTCTTTCATCCCATTCGTTCCACCGTCACTATCCGCCAGTTCCCGCGTCTCTCCGTCAGCAGCGCGGAG CAGCCGGCTGTTCTGCAGGAGGAGGAGGAGGAGCTGCCGGAGTACGAGGTTTTCGATTTCGACGCGGCGGCAGCGGAGGT TGAGGTGAAGCGTCTGCCGCCGCGGCCGGAGGTGGAGGTGAAGGAGCTGAGTGAGTTGCCGGAGCTGTGGCGGAGGTCGA GGGTGGCGTGGCTATGCAAGGAGCTGCCGGTGCACAAGGCGGGGACTCTGATCAGGATACTGAACGCGCAGAAGAAGTGG ATGAGGCAAGGAGACACCACCTATGTCGTGATGCATTGCTTGCGGATTCGGGAGAATGAGACTGCGTTTAGGGTAAGTGT AGTTTAGTGTAGTGATTCTTCTTCGCTTTTATCATTTGTAAACTTTAGGAGTTTATCTTATAGAATAAACACTTAGATAA AGGGTCTCAAACTCTCAATGCAATGCATGTGTTTGGATAAGGATAAGCTTATGAAAAAACTATGAACACTTGTGCTTTTA TAAGAGCTTAACTTGTAGTTTAAGCGATTTCTATGCTAGTATTTGGATAAGTTTAATGGCCTACCAATAAGTTGTTTTAA GCTTAATTTTACAAGCGGTTCATATTAACTTATGAATAAACACTTATATCTACCTATAAACTAATTTGAGCTTATTTCGA TAAGCTTTTCAAATTTGTTTATGAATAAGGGCTTATGTGAAAATAACCTTTTGAGGTTATATTCATGAACTTTTTATATA GAGTATGAAAATAACGTATGGCTTATTTATAAGCTTTTTTGAGCTTATATTCATGAACTTTTAATATAGAGTATGAAAAT AACTTATGACTTATTTATAAGCTTTTTTTAGCTTATATTCATGAACTTTTAGTAGAGTTTTTGAACTTATTCCAGTGAAG TTTTCGAATTATCTGGTATAAGTGCATGATTAAGTTATTTACCTAAAAGAAACCACTCTTAAGTGCACTTTTGAAGTTTG CAAACTATAATCTTTAATAATTTAGATTCCAGTAGAGCTGTAATATGCGAAAATTTGTGCTCGAAAAAAATGAACCAATT GATAAATAAATGAACAAGACTATGAAGGTAGAGGTGAGAATTCATTGGAAGTTAAACTGCTAGTCAAGTTGTTTGGTTCT TACTAATTCATGCGTATTGTTTCTGTACTATAAGGTATCAGAATGGATAGAGAGAGGGAGGAAGAGAATGATATCTTGAG AGAAAGTAATTGAGGTTTCATCTTATTATCATGTGTTGGATAAGTGATACACCATTTATTTATACTATGAAACTGGAGTA ACTAAGCTAAGATGAGACGACTGCACATGCTAACAGATAAACTCTCTAACTGGATTAACTAATCTTTTGTTTTTGTGTAA TTAAACCATGCTTTTGTTTTCGTGTATTTTTTTGTAACATTTTAAAGATGATTTTGCATGTGGAGATTGATGAGAACCAT AGGCTTCAATTCAACTATGGGAGGAATTGTGGAAAATGCTATTTTATTTGCATGTGATATTGGTTTAATGCTTATGGAAG AAGGGAAGCCTGTGGTGAGTCTTGTAAGTTATCATGTATTGACAGTGTTGTTTTGGATATTCATGAAATTGGTGTTTTAG CAAAGTTCCAAAGCTGTGATACTAAACGTTAGTTATAGTTTTCTGGTATAAAGCTTGTGGATTATAGATTCAGCGAAAGG TATAGAACTTTCCCTTGGAGATAAATGATCAACTTTTAAAATGATCAAATTTAAGTGTATCGAACTTTAAAAATAGTCAA CTTTTGAGTGTGGTATATATTTGGGTGTGGGATAGTAAATGGTATATGTTAGAAGTCCCACATTGGCTAGAGATAGAGCA TAGATAGCCTTTATAAGGGTAGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTA ATAGTATAGAACTTCCCTGTTGCTAGTCTTGCGTCATTATTGATCATTTTGTTTACCTTTAAATGTTCTATCAGATCAGT TCTTCCCGGGAATTGGTTTTTTATTCTGCTTTTCTCCTACTTTTGGAATGGGTATTTGGCATTGATTATTCATTTATTTG ATCACATAAGCAGAACATTTTGCAAAATATTACCATTAGCTGGAAATCAATTACTAATTTATTTATTTTTTGCCCTCGTA AAGGTATACAAGTGGATGATGCAACGAAGTTGGTATCAATTTGATTTTGCTCTTGCCACTACGCTCGCAGATTACATGGG TAAAGAGCGAAAGTTTTCTAAGTGCCGTGAGGTATTTGATGATATTATCAATCAAGGCCGTGTTCCTAGCGAGTCAACTT TCCATATATTGATTGTAGCTTACCTTAGTGCTCCTGTTCAAGGTTGTTTGGATGAAGCATGCAGCATTTACAACCGTATG ATTCAGTTGGGTGGTTACCAGCCCCGTCTTAGCTTGCATAATTCCCTCTTCAAAGCTCTTGTAAGCAAACCAGGGGTCTC TTCAAAGGATTACCTTAAGCAAGCTGAGTTTATATATCATCAATTGGTTACTTCTGGACTTGATGTGCATAAGGATATTT ACGGGGGTCTAATTTGGCTGCATAGCTATCAGGACTCCATAGATAAAGAACGGATAGCAGCATTGCGGCAAGAGATGTTA CGTGCTGGAATTAAGGAGGGCAAAGAGGTGCTGGTATCGATCTTGAGGGCTTGTGCAAGGGAGTGTGAGGTGGAGGAAGC AGAGAAAACTTGGTCCAAACTTCTTCCTTTTGAAAGTAATCCCCCATCGCAAGCTTTTGTGTATAAAATGGAAGTCTACT CAAAAGTTGGCATGCCTATGAAGTCCTTGGAGATATTTAGGGAAATGCAATTGAAACTAGGTAAAATAAGTGTTGCAGCC TATAGTAAAATAATAGAGATACTATGCAAAGCACAAGAATCAGAGTTTGCAGAATCAATCATGACAGATTTTGTCAAGAG TGGCCTGAAACCCCTTACACCATCATACATTGATTTACTAAACATGTACTCCAATTTGGAATTACATGATAAATTGGAAG AGACATTCTCCCAGTGCCTGGAGAAATGTCGTCCTAATTGTACTCTCTACAATATATATTTGGATTCTTTGGTAAAAGTT GGTAATCTTGACAAAGCAGAGGATATCTTTTACCAAATGAATCGGGATGTGACTATTGGTGTCAATGCTCGATCGTGTAA CGCAATCTTAAGAGGATACTTGTCCTCGGACAATCACTTAAAGGCGGAGAAGATCTATGACTTTATGTGCCTAAAGAAGT ATGAAATTGAAACCTCATTGATGGAGAAGCTTGACTATATCTTGAGCTTGAGAAGAAAATTTATTAAAAAGCCTGTGAGC CTCAAGCTAAGCAAAGAACAGAGGGAAATCTTAATTGGATTGCTTTTAGGTGGCCTGCAGATTGATTCTGATGACCAAAG GAAGAATCACGTTATCTGTTTTAATTTTGATAGCGATTCCATCAGTCATCATGTCCTGAAGAGTCATTTACATCGCCAGT TTTATGAGTGGCTGCATCCTACTTGTAAGCCAAGTGATGACAGTGAGGACATACCAGCTAAGTTTTGCACCATTGCAAGC TCTCATTTTGGCTTTTATGCAGAACAGTTTTGGTCAGAAGGTCAACCTACAATTCCAAAACTAGTCCATAGGTGGCTGTC ACCGTGTGTTCTTGCATACTGGTACATGTATGGGGGTCGACGAAGTTCGTCCGGTGATATTTTACTAAAGATAAAGGGAA GTCGTGAGGGTGTTCTGAGCATTGTCAAAAAGTTCAAAGCAATGTCCATGGATTGTAAAGTAAAGAGGAAAGGAAAGGTA TTTTGGATTGGTATTCTCGGAAGCAATTCAACTTGGTTCTGGAAATTGGTTGAGCCATATGTTTTAGAAGACGTAAAATA CTTTCCAGAGACACGTGATAAGATGCTGGAGCAGGATTCAGTGGAAAGTCAAGACAACATTAACTTCAATAGCGATTCAT ACGAATGAAGAAGGTGGTACTGCATTATGCTTTATTAGGCGTTTGCATGCCCAATGATCAAGATTTCCAAATTTCATAAA TGATGATGGTTTGGAGAAGTGGCTTTTGTGGCCAGAACATGTTTGAATTTTGTACTTCTCGTGATTCTTATCGCTGAAGT AACTGCGATGGCTGCAAAATGAAAGGACTTGAATATTGTGGTAACCTTCCTCTGAAATGTCCTAGTTGTATATTGCTAAT TTCTAATGCACAGAGAACTAGAGAGTAAAGATTTTGCTGTATTTTGTAGTTAATCTGTAACTGTTATTCGGCATAATATG TATTTTATTTTCAACATGGTTGTGGCATTGCTTTGAATGATCTTGATTGTTCTTTCTCGCCGTTTAATTATTGTAGCATT GCAGTACCATAAGTACTGTTGGTCCTGTTATCCAACCAAAATATTACACATGGACTATCTTTCCACATCATTACCACTAA CCTTCATTTTTACTGTCCCTTACCACTACCATGGATTCTCATTCATACAGAGCCACACTCAAGACAAGATAGCTACCACC GCACACTGTTTCTCCTTTTGAAACTACATCTCATCATCACCAATTCACCATTAAAGAGCCAAAACCTGAAGCCCCACCTT CCAATGGGAGAAATTGAAGGTAGGAACCCAACCCATTTATGAATTCTATACAGGAACGTAGCAGCAGGATTTGTTCTACG TTTGAAACTTCTCAATTCTATGAATCAAGACTTAATTGATGTATGCTGAATTTGCAGAGGGGCTAAGAGAATGCCTCTAC AAGCACTGAGAGAGTGATTCATGGCCTTCTCCATTTGATCACTATCCATGTGGCGGTTGTTGGGTCCTGCGGATTCAACA TCGGAATTTGTGAGTGTGGGAAGACCTGGCGGTTGAAGGAGAGAAGAGCGCTTTGGTTGCCCTCAGTTTCTGGTGGTGAT GACAGTCCACGTTTAATTATTTGAATGAAAACTGTGGATAATCCTTTGCAACAATGGAAGACACCAATAAAAGTATTTCG AGTTGCTGACAATCCAATTGGTGATATACAAACTCAATCATATTTGTTATTACTGTGATAAGTGATCGCATTGCTTATGA TTTACATCTAATAAATAATATTCATCTTAATTATTGGATATCACACACAGATATATGACAGATAAGGGAATAAGATTTCA TCCTCAGTTTTGTACAATGAATTCCGCACATACAATATCTAGTAGAGAATGAGAATGATAAGAACATGAAGTCATAGACT CATACTCATATTTTCTTCAGAAGCAAAAGAATATCGGTACTGTTACATTGAAAAACAAGAGGTAAAAAATTATCAGCTAC AAGTTGTAATTATCAAGCCCCAAATCCCTCAGTGCATCTGTAGCAGCATCCTTACAGTTTCCATGTGTTTGCTTTGCCTT CCTTATGTATTTCTCAATTCCATTTTTAAGCAATATAGTTCTGTCCAATAGAAAGTGTGCAAGTGAGCAATGATCAAGAG GTAATAGGATTGACAACCTTTGAATTTAACTCCTCTAAAGTGAAGGAACTGCTTTCAAGAGTAGAGTAAATCGTCACAAC TGTTAATTGAAAATTGACAGTTGAAATTTTTAGAGCAACATAACTTGTTATACATGTGCAAGTATATGATACAGTCTCAA CCGTTGATTTCTCAATCAATTGTTGTGATGACCGGTGACCTACTTTACCCTTTAAAGCCACTCACTCACTCTAGAGGAGC CAAATCCATAATCTTCTATCTCTAGCTGAGCTACATTCCCTTGTATAATATGCTAGAAGGCAAGGATTGGAAAAATATAA AAGAAGGGGGAGATAAACAGAAAAGAATGCCTGGCGCTGTATAATTAAACGTCTTACATTAGGAATATCACAAATTATAA ACTTGCCTGTTCTCTGGATTTCTGACTACTAGGTTTCTGATCATAAGACAGGAGCTTCTTTGCATTTGGTGTGCTGCAGG AAATTTCTCCATGGCTTGAATAGCAAGGTCACCAGCACCAGCTTCAATGGCACGAGCTGCATTTTCTGGGGATCTTAATG AAAGCACAGAAATGATAGACATAACCTGTGCCACAAATAAAATGAAGACAGGTATAAGATGCACAGATACGAACTGAGAG TAAACAAGCATATCAGGACTTGTAAAGATAAAATTCTGTCTTGGATATGGCCAGAATTTTGTAAATGTTGGCACTTGGCA CCCATAAGATGATGAAGTATATCAGGAATTAGGACTATGTTCAACTATAAATGATTACAGAATTTCCACATTTTCAAATT AGTCAATGTCCATTCTTTGGTTAAATAAAGCCAAATGAATAGCAATACTAAAGTGGAAGAATAAATCAGTAGATGAAATA ACATGAATCAATTATCAAACTAGCAATAAGTTACTATATTTGGGATAGGTTGTCAAAAGACTGGTTGTTTTGAATTCTAA ACACAGGCTCCGTATACAAAAATTGCAGGTTCTCACCTCTTGCAAAACAGAAGGGTCATCAGCACATCTGGCAGAAAGTT TGATAAGCTTATCCATACCCCCCTTTCCAACGATTGCATTCTTGTTTGCGTCGCTTCCTGCTAACTGATCAGTTAAACAT ATAATGGAATCATTCAAATCAAGAAAACAAAATGCAAAAGTAATCATCCTATCACATTTAAAGTAAAAAGGGAGCTAAGG CAGACAATATTTCCAAAGGCAAGTCTAGTGGAGGATACAAGTGCTTTGAACCTCAGGAGTTAAAGGCAATCAAGTAATGA ATATGTAATTCATTTTTTCCCCATATTAGTCAAGTATGACATAATTCACATAAATATTTAAATTCAATATTATGAACTGT AAGAAAAGCATAGGAAAATAAAAGCCCAGGTAGTATTGGAGGCCAAATCACTCCAGTTTTTGCTTCTTCCAGCTTTTGCG GAAGCTTAGCCAAATTTTATCAGTTATAAGAATGGTGTGATATGCATTCTTTTATTTCAAAAAAATATAAGATGCAAAGG ACATCTAGGACACAAATAATGAAACAAACTCAGGTAGGAAACTTAGAGGGAGAACTCAAACACTCAAAACAACCGCTGGA AGTGGGGGGAAAAAAGGAAATAAATAATAAGTAAAAAAAGTCCACGGTCCAGAGTGAACATTTTGAACCTACATTTGAAA GTAATGAGCAACAAACTTTGGCCACAGCTTTGTTGCCTTGTTCACCACTGTCATCTATACATCTGAGCACTGAATCAATA CCACCTTTATCAGCAATGGATTTACATATTTCATCCTGCAACACAATATAAATACTCAACAAAGATAACACAAGAGAATG CATATTAGTTTAAGTGTTTCAATTTAATGGTGTTAACAAGAGTGGCACAACATCCCAAATCTAAATATTAAGAAACATTA CAAAAATCTAAGGGTATAAAGAATAAAAACTTGAGTTCAAGGCATCCCCATTGACCAATCTACTAATTGTGAGCCATTGT CCTACAAAAAGATACATAGGCAAGTGTCACCCACAATTAGCCATGATTTATTTTTCTATTAATGAGTCCACTCGCACTAT CAACCCGTTTCTTCATGAAGAAAGAAATATCATGAGGATAGCTTCAGAAAGCTTCCACCAAGGTCATCCGACTCAGGAAA AGGAATGGCAGCCATTGCAGCAGTAACTCAACATTTGGCATCATACAAGTATACAACTATTATGAATAAAATTAGAATAA AAAACTATTTTTAGATTAGAATTGAAGATGACTAATAATTTTCTGTAGGAGCAGTCACTTCAAATATTACCTAAAACAAT CCAGCTAAATTATTTTGATCTAATGGCCATTTTCCCTTGAAATATAATGCAAAGTGAATACTGCATACTAGATGTAGGGT AACTTCTCTTACATTTACAGCAATGGCCTTTAAGGTGATGCATGCTGATACTAGGTGAGGGGAGCTAAGTCCTGCTCGCA GAGAATCCACAATGGCATCTGCAATCCCAATCTTAGAAAATTTCCGTGCATAACCATATACCTGAAAATTGGATGTATTG GCTAAAGTCATGATGCACACTTAACTGAAATGATAGCAACTTACAATTTCGAAAGACCCTCCTATTTACCAAATTATGTT GCAAACTTCACGCCTTTTTCTTCTGTGTGTGCATGTGTGACACTATATTTCTTCAAATCATATATGACATACGCACACTC AAGCAGCCTTTACTTACTTGCGAAGCAACAACTCTATTGTCGTCAGGTGTTAAAAGAGCACGAATAGCATCATATACATT TTGAATTCCAGTGTTCTTATGTATGGACATTATCTCCATAACTAACTCATCAACTTTCAACTCCATGAATGACTCCTTGA CAATCTCATCACCAGTTGCAGCTGAAGCCACAACATGAAAGCCACTGTCTAGGATGTCTATCTTTTGCTTGTTATCATTT AAGATATCAACTATAATCCTAGGTCCATTACTTCTCTGAAATGCTCCAGTACTTTGAACATC
CDS sequence (LotjaGi2g1v0008500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATTTTTGGGGTCAATAAAGCCCAAGTATCTCCTCCAATTATTACATAGAGAGAACATGGTGGTGAGACTCACAGG CCAAGAGCTTCTTCTTCCATTTCAACTCCCTCCTCTTTCTCGCAACACACTCTCAAACCCTAAATTCTTTCATCCCATTC GTTCCACCGTCACTATCCGCCAGTTCCCGCGTCTCTCCGTCAGCAGCGCGGAGCAGCCGGCTGTTCTGCAGGAGGAGGAG GAGGAGCTGCCGGAGTACGAGGTTTTCGATTTCGACGCGGCGGCAGCGGAGGTTGAGGTGAAGCGTCTGCCGCCGCGGCC GGAGGTGGAGGTGAAGGAGCTGAGTGAGTTGCCGGAGCTGTGGCGGAGGTCGAGGGTGGCGTGGCTATGCAAGGAGCTGC CGGTGCACAAGGCGGGGACTCTGATCAGGATACTGAACGCGCAGAAGAAGTGGATGAGGCAAGGAGACACCACCTATGTC GTGATGCATTGCTTGCGGATTCGGGAGAATGAGACTGCGTTTAGGGTATACAAGTGGATGATGCAACGAAGTTGGTATCA ATTTGATTTTGCTCTTGCCACTACGCTCGCAGATTACATGGGTAAAGAGCGAAAGTTTTCTAAGTGCCGTGAGGTATTTG ATGATATTATCAATCAAGGCCGTGTTCCTAGCGAGTCAACTTTCCATATATTGATTGTAGCTTACCTTAGTGCTCCTGTT CAAGGTTGTTTGGATGAAGCATGCAGCATTTACAACCGTATGATTCAGTTGGGTGGTTACCAGCCCCGTCTTAGCTTGCA TAATTCCCTCTTCAAAGCTCTTGTAAGCAAACCAGGGGTCTCTTCAAAGGATTACCTTAAGCAAGCTGAGTTTATATATC ATCAATTGGTTACTTCTGGACTTGATGTGCATAAGGATATTTACGGGGGTCTAATTTGGCTGCATAGCTATCAGGACTCC ATAGATAAAGAACGGATAGCAGCATTGCGGCAAGAGATGTTACGTGCTGGAATTAAGGAGGGCAAAGAGGTGCTGGTATC GATCTTGAGGGCTTGTGCAAGGGAGTGTGAGGTGGAGGAAGCAGAGAAAACTTGGTCCAAACTTCTTCCTTTTGAAAGTA ATCCCCCATCGCAAGCTTTTGTGTATAAAATGGAAGTCTACTCAAAAGTTGGCATGCCTATGAAGTCCTTGGAGATATTT AGGGAAATGCAATTGAAACTAGGTAAAATAAGTGTTGCAGCCTATAGTAAAATAATAGAGATACTATGCAAAGCACAAGA ATCAGAGTTTGCAGAATCAATCATGACAGATTTTGTCAAGAGTGGCCTGAAACCCCTTACACCATCATACATTGATTTAC TAAACATGTACTCCAATTTGGAATTACATGATAAATTGGAAGAGACATTCTCCCAGTGCCTGGAGAAATGTCGTCCTAAT TGTACTCTCTACAATATATATTTGGATTCTTTGGTAAAAGTTGGTAATCTTGACAAAGCAGAGGATATCTTTTACCAAAT GAATCGGGATGTGACTATTGGTGTCAATGCTCGATCGTGTAACGCAATCTTAAGAGGATACTTGTCCTCGGACAATCACT TAAAGGCGGAGAAGATCTATGACTTTATGTGCCTAAAGAAGTATGAAATTGAAACCTCATTGATGGAGAAGCTTGACTAT ATCTTGAGCTTGAGAAGAAAATTTATTAAAAAGCCTGTGAGCCTCAAGCTAAGCAAAGAACAGAGGGAAATCTTAATTGG ATTGCTTTTAGGTGGCCTGCAGATTGATTCTGATGACCAAAGGAAGAATCACGTTATCTGTTTTAATTTTGATAGCGATT CCATCAGTCATCATGTCCTGAAGAGTCATTTACATCGCCAGTTTTATGAGTGGCTGCATCCTACTTGTAAGCCAAGTGAT GACAGTGAGGACATACCAGCTAAGTTTTGCACCATTGCAAGCTCTCATTTTGGCTTTTATGCAGAACAGTTTTGGTCAGA AGGTCAACCTACAATTCCAAAACTAGTCCATAGGTGGCTGTCACCGTGTGTTCTTGCATACTGGTACATGTATGGGGGTC GACGAAGTTCGTCCGGTGATATTTTACTAAAGATAAAGGGAAGTCGTGAGGGTGTTCTGAGCATTGTCAAAAAGTTCAAA GCAATGTCCATGGATTGTAAAGTAAAGAGGAAAGGAAAGGTATTTTGGATTGGTATTCTCGGAAGCAATTCAACTTGGTT CTGGAAATTGGTTGAGCCATATGTTTTAGAAGACGTAAAATACTTTCCAGAGACACGTGATAAGATGCTGGAGCAGGATT CAGTGGAAAGTCAAGACAACATTAACTTCAATAGCGATTCATACGAATGA
Protein sequence (LotjaGi2g1v0008500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFLGSIKPKYLLQLLHRENMVVRLTGQELLLPFQLPPLSRNTLSNPKFFHPIRSTVTIRQFPRLSVSSAEQPAVLQEEE EELPEYEVFDFDAAAAEVEVKRLPPRPEVEVKELSELPELWRRSRVAWLCKELPVHKAGTLIRILNAQKKWMRQGDTTYV VMHCLRIRENETAFRVYKWMMQRSWYQFDFALATTLADYMGKERKFSKCREVFDDIINQGRVPSESTFHILIVAYLSAPV QGCLDEACSIYNRMIQLGGYQPRLSLHNSLFKALVSKPGVSSKDYLKQAEFIYHQLVTSGLDVHKDIYGGLIWLHSYQDS IDKERIAALRQEMLRAGIKEGKEVLVSILRACARECEVEEAEKTWSKLLPFESNPPSQAFVYKMEVYSKVGMPMKSLEIF REMQLKLGKISVAAYSKIIEILCKAQESEFAESIMTDFVKSGLKPLTPSYIDLLNMYSNLELHDKLEETFSQCLEKCRPN CTLYNIYLDSLVKVGNLDKAEDIFYQMNRDVTIGVNARSCNAILRGYLSSDNHLKAEKIYDFMCLKKYEIETSLMEKLDY ILSLRRKFIKKPVSLKLSKEQREILIGLLLGGLQIDSDDQRKNHVICFNFDSDSISHHVLKSHLHRQFYEWLHPTCKPSD DSEDIPAKFCTIASSHFGFYAEQFWSEGQPTIPKLVHRWLSPCVLAYWYMYGGRRSSSGDILLKIKGSREGVLSIVKKFK AMSMDCKVKRKGKVFWIGILGSNSTWFWKLVEPYVLEDVKYFPETRDKMLEQDSVESQDNINFNSDSYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 75 | 787 | 713 | 0.0 | – | |
| Gene3D | 134 | 281 | 148 | 6.9E-18 | ||
| SUPERFAMILY | 167 | 545 | 379 | 2.12E-5 | – | |
| ProSiteProfiles | 189 | 223 | 35 | 7.355 | ||
| ProSiteProfiles | 224 | 261 | 38 | 6.675 | ||
| Gene3D | 282 | 473 | 192 | 6.9E-16 | ||
| ProSiteProfiles | 341 | 375 | 35 | 6.478 | ||
| ProSiteProfiles | 376 | 406 | 31 | 5.788 | ||
| Pfam | 385 | 404 | 20 | 0.26 | ||
| ProSiteProfiles | 411 | 445 | 35 | 8.89 | ||
| Gene3D | 474 | 558 | 85 | 1.9E-9 | ||
| ProSiteProfiles | 480 | 510 | 31 | 8.616 | ||
| TIGRFAM | 483 | 507 | 25 | 1.9E-4 | ||
| Pfam | 483 | 509 | 27 | 0.0026 | ||
| ProSiteProfiles | 516 | 550 | 35 | 7.673 | ||
| Pfam | 519 | 544 | 26 | 0.4 | ||
| SUPERFAMILY | 573 | 761 | 189 | 2.3E-33 | ||
| Pfam | 582 | 747 | 166 | 2.2E-41 | ||
| Gene3D | 671 | 768 | 98 | 8.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0008500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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