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IPR007194 is a Transport protein particle (TRAPP) component.
<p>TRAPP plays a key role in the targeting and/or fusion of ER-to-Golgi transport vesicles with their acceptor compartment. TRAPP is a large multimeric protein that contains at least 10 subunits. This family contains many TRAPP family proteins. The Bet3 subunit is one of the better characterised TRAPP proteins and has a dimeric structure [[cite:PUB00020480]] with hydrophobic channels. The channel entrances are located on a putative membrane-interacting surface that is distinctively flat, wide and decorated with positively charged residues. Bet3 is proposed to localise TRAPP to the Golgi [[cite:PUB00020479]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Transport protein particle (TRAPP) component [Theobroma cacao] gi|508782330|gb|EOY29586.1| | 8 | ||
| – | Transport protein particle (TRAPP) component [Theobroma cacao] gi|508782330|gb|EOY29586.1| | 10 | ||
| – | PREDICTED: trafficking protein particle complex subunit 6B-like [Glycine max] gi|356505902|ref|XP_003521728.1| | 7 | ||
| – | PREDICTED: trafficking protein particle complex subunit 3-like isoform X2 [Cicer arietinum] gi|502143721|ref|XP_004505441.1| | 10 | ||
| – | Trafficking protein particle complex subunit 6B; TAIR: AT3G05000.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q32L78|TPC6B_BOVIN Trafficking protein particle complex subunit 6B; TrEMBL-Plants: tr|I1JRI0|I1JRI0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0165300 | 9 | ||
| – | Trafficking protein particle complex subunit 3; TAIR: AT5G54750.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q5ZI57|TPPC3_CHICK Trafficking protein particle complex subunit 3; TrEMBL-Plants: tr|I3SMY8|I3SMY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149700 | 11 | ||
| – | Trafficking protein particle complex subunit 3; TAIR: AT5G54750.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q5ZI57|TPPC3_CHICK Trafficking protein particle complex subunit 3; TrEMBL-Plants: tr|I3SMY8|I3SMY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149700 | 11 | ||
| – | Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700 | 11 | ||
| – | Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700 | 9 | ||
| – | Trafficking protein particle complex subunit 5; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3SPD0|I3SPD0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069700 | 9 | ||
| – | Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3S8A6|I3S8A6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0069900 | 9 | ||
| – | Trafficking protein particle complex subunit; TAIR: AT5G58030.1 Transport protein particle (TRAPP) component; Swiss-Prot: sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5; TrEMBL-Plants: tr|I3S8A6|I3S8A6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0070000 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd14943 | CDD | 1 | 8.33 |