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IPR007461 is a Ysc84 actin-binding domain.
<p>This entry corresponds to proteins having the Ysc84 actin binding domain (YAB). This 184 amino acid domain lies at the N terminus of the Saccharomyces cerevisiae (Baker's yeast) protein Ysc84 ([swissprot:P32793]). It is essential for the organisation of the actin cytoskeleton, and interacts with the Arp2/3 complex [[cite:PUB00043838]]. Homologous domains are found across a range of species. In fungi and vertebrates the domain is at the N terminus, while there is an SH3 domain at the C terminus. In plants the domain seems to be at the C terminus and in association with a FYVE domain. Interestingly, the domain is absent in invertebrates.</p> <p>The domain is also found in prokaryotes, where presumable it is also involved in protein binding, perhaps to the prokaryotic homologue of actin [[cite:PUB00007698]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RING/FYVE/PHD-type zinc finger family protein [Theobroma cacao] gi|508782892|gb|EOY30148.1| | 14 | ||
| – | RING/FYVE/PHD-type zinc finger family protein [Theobroma cacao] gi|508782892|gb|EOY30148.1| | 15 | ||
| – | RING/FYVE/PHD-type zinc finger family protein isoform 1 [Theobroma cacao] gi|508780652|gb|EOY27908.1| | 15 | ||
| – | Tubby-like F-box protein; TAIR: AT1G29800.2 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9ZP59|TLP1_ARATH Tubby-like F-box protein 1; TrEMBL-Plants: tr|A0A0S3S312|A0A0S3S312_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0077300_LC | 7 | ||
| – | SH3 domain-containing protein; TAIR: AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|I1MS36|I1MS36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0319700 | 14 | ||
| – | SH3 domain-containing protein; TAIR: AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|I1MS36|I1MS36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0319700 | 14 | ||
| – | SH3 domain-containing protein; TAIR: AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|A0A0L9TRV1|A0A0L9TRV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0220500 | 15 | ||
| – | SH3 domain-containing protein; TAIR: AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|A0A0L9TRV1|A0A0L9TRV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0220500 | 15 | ||
| – | SH3 domain-containing protein; TAIR: AT1G29800.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|A0A151S6H7|A0A151S6H7_CAJCA SH3 domain-containing protein PJ696.02 family; Found in the gene: LotjaGi6g1v0317900 | 15 | ||
| – | SH3 domain-containing protein; TAIR: AT1G29800.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02; TrEMBL-Plants: tr|A0A151S6H7|A0A151S6H7_CAJCA SH3 domain-containing protein PJ696.02 family; Found in the gene: LotjaGi6g1v0317900 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 10.00 |