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IPR008803

Source: InterPro

Description

IPR008803 is a RHD3/Sey1.

<p>This family consists of plant root hair defective 3 (RHD3) protein and its homologues from other eukaryotes. RHD3 is a conserved protein with GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments [[cite:PUB00011441]] and is also involved in homotypic ER membrane fusion, being classified as a dynamin-like GTPase together with its homologues Sey1 and atlastin [[cite:PUB00098270]]. It is required for appropriate root and root hair cells enlargement [[cite:PUB00011441]]. It may play a role in cell wall biosynthesis and actin organisation [[cite:PUB00064782], [cite:PUB00064783]]. Its homologue from Saccharomyces cerevisiae, Sey1, mediates homotypic ER fusion [[cite:PUB00098270], [cite:PUB00053138]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0104159.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max] gi|356555849|ref|XP_003546242.1|
Domains
9
Lj3g3v0488310.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max] gi|356532989|ref|XP_003535051.1|
Domains
4
Lj3g3v0948660.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cicer arietinum] gi|502080043|ref|XP_004486443.1|
Domains
4
Lj3g3v0965540.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max] gi|356555849|ref|XP_003546242.1|
Domains
4
Lj3g3v2693010.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max] gi|356522460|ref|XP_003529864.1|
Domains
17
Lj3g3v2693010.2
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max] gi|356522460|ref|XP_003529864.1|
Domains
17
Lj6g3v1690540.1
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max] gi|356555849|ref|XP_003546242.1|
Domains
13
Lj6g3v1690540.2
– PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max] gi|356555849|ref|XP_003546242.1|
Domains
11
LotjaGi2g1v0084900_LC.1
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2; TrEMBL-Plants: tr|I1MG11|I1MG11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0084900_LC
Domains
4
LotjaGi2g1v0148200_LC.2
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2; TrEMBL-Plants: tr|A0A0B2NTE0|A0A0B2NTE0_GLYSO Squamosa promoter-binding-like protein 12; Found in the gene: LotjaGi2g1v0148200_LC
Domains
5
LotjaGi3g1v0025900.1
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9SSN0|RHD31_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 1; TrEMBL-Plants: tr|I1KGC2|I1KGC2_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi3g1v0025900
Domains
16
LotjaGi3g1v0425400.1
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9SSN0|RHD31_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 1; TrEMBL-Plants: tr|I1KGC2|I1KGC2_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi3g1v0425400
Domains
17
LotjaGi3g1v0425400.2
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9SSN0|RHD31_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 1; TrEMBL-Plants: tr|A0A0B2S3W0|A0A0B2S3W0_GLYSO Protein ROOT HAIR DEFECTIVE 3 like 1; Found in the gene: LotjaGi3g1v0425400
Domains
17
LotjaGi6g1v0274800.1
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2; TrEMBL-Plants: tr|I1MG10|I1MG10_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi6g1v0274800
Domains
17
LotjaGi6g1v0274800.2
– Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2; TrEMBL-Plants: tr|I1MG10|I1MG10_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi6g1v0274800
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67