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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0274800 |
| Transcript ID | LotjaGi6g1v0274800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2; TrEMBL-Plants: tr|I1MG10|I1MG10_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi6g1v0274800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59160851..59169090) extracted from Lotus japonicus Gifu genome v1.2.
AAACTTCACGTCTCGTTTATTCTTCTCTTCTCTTGTAAACAGTGCAGTGAAAGAGTCGCACCACAATCAACGAATCACAG ATCCAAGTCAGAGAGATCTGAACTTCACTCCGATCCATGGCGAGAATCGACGACGATTGCCACGCCACGCAGCTCATCGA CGGCGACGGCACCTTCAACGTCGCCGGCCTCGACACTTTCATCAAAACCTCCAGCCTCGCCGCTTGTGGCCTCTCCTACG CCGTCGTCGCCATCATGGGTCCTCAAAGCAGCGGTGCGTTGTGCTTTCGTTCCTGAATGAACTTGTAGTTGTAGTCAATG GATCGGTGACTTCAATCACCGTTTCCGAGCTTGCTCTGAAGTTTTGTTACTTGAATTTCGTGATTCTACTGCTTCTTGGT TTAGGTTTAGTTGAAGTGAGTAGTGAATCAGTAGAATGAGCGGTTTTCAGTTCTACGAATCTGAAACAGTGTTAGGGTTA TAAATTGGAGATGCTTTTATTATCCGTTTCTGATTTTGCAGTTTTTTCATGGATTGTCAAACTAGTACAGTTTCTGAACT TGTGGTTTTATTTTGTGAATTGAGCAGGGAAGAGTACATTGATGAATCATCTTTTCCACACAAGTTTCAGGGAGATGGAT GCTTTCAGGGGAAGGTTAGCTTTTCTAAATTATTGTTGGCAGAGAGAAGAACATTGGAAGGATAGAGAGAGAACAATAGA TGAAAACTGAATGTTGTCATTCATGCTGCCTGTTAAGTTTTATTTTATGATGAAGTAATTGAATATCATGTTGTTGTAGA TCGCAAACGACTAAGGGCATTTGGATAGCCAAGTGTGTTGGAATTGAGCCTTGCACTGTTGCTATGGATTTAGAGGGCAC TGATGGAAGGGAGAGGGGTGAGGTACTGATTCTGTACTGCTTTTTTTAATGTACGCTGTTATTTTCACACAACTGTTATT GGTTTAGGTAAAAATCATGTGCATGGTAAATCAGTTTCATTCGATGATTCATTAGCGGATATTGATTTTGATCAGGGGCG TATCTAACTCTAAAGGGGGGCTGGCAGGCTACGACCCCCAAGAATTTTAATTTCTTATCGACTATATGTATTTTTGCATA GAAATATTTTTAATTTTTAGTCTGCCCCACATAGAGATTTTATAGTTTGTTATAATTTATTTTGGTTCCCCAACGATAAA ATCCTGGATACGCCCCTGATTTTGATCCACTATTTGAGTTGGGAGTATTAAGTCCTTGTTTTTGCTGCATCTAGTTCTTC TTGTGGTCAAATTATTTTGAATGTTTGAACAGTCAGACATCTTTACCACTAGATAGGATTAGCTATACAGATCAAATGAA ACCACAATGTCCTATAATCAAATGACACCTCTCCCTCCAACTACCAAAGGTTCTCATTTGAAAATTCTTTTTTGGAGTTT TAAAGCTACCTCTTAGTGTCATGTAAGATTCATCCTTTTTCTGTTTTATTTATAAATGAAAATTTTATGCCACTATTTAA ACACATCAGTACATTGTCTTTGTATCATACATGATCCCTATGTTTGGAGTTGGATTTTGTAAATGTATGCTCTCAGTGCC CCTTAAGACTAGGTTCTAGCTTCTCTTTGACTGACAAATCTGATTGCATGTTCATCTATATCTGTCTTGGTTTACATGGT GTACATATTTTATATCATGGAGCTGTTCTCTCTCTCTTTGTTGCATCTATATAAGATCTCACTATATCTTTCTTTTTTTT ATCAGGATGATACCGCTTTTGAGAAACAGAGCGCTCTTTTTGCTTTAGCAGTATCAGATATTGTTCTGATAAACATGTAA GTTTTTAGGTCTAGATTATTGCATATAATTGATTAAATGAATCATATTCTTAGGTGATCCTTCAAGTTAGGCGTAGTCCA GGTTGAATCTCAAATCTTTTAGTCTAACTTGGTGCATTTAATGTTTGTTCTAGTAACTTATGTTTCATAATAATCTTGCT CATACCTAATGTACCTGACACTTGGGATCATTGAAATTTATATGGTGAGTATAGCATGTAATACAATGTAATTCATTTCA TAATGGGAGGTGTATAAGTAGATGATATGCATAAAGCCATAAAGGCATTTTCCTTTTTCTTTTCCTATATCACCGTACTT TACAATCCTTCCAAATCATTTTTCTTATTTCCTTTTTTTGAGACAAATTAGTAGTCAGTTGTTTCATGGGTTATGAGAGC TTACAGTACATATACGCAGTCATATTTTAATCTATTTTGAACAATTATTGAAGATTTGTTTCTTCACAGGTGGTGTCATG ATATTGGTCGAGAACAAGCAGCCAATAAGCCTCTTTTAAAAACAGTTTTTCAGGTAGTTTGCAGCATGGGCTTGCTTCTG GTTGGAATTCAGTATGTGTCTCTAAACTTCAACTTGTCTTTTATTTGTAGGTGATGATGCGTTTATTCAGTCCCCGCAAG ACAACATTGCTTTTTGTTATTCGTGATAAATCAAAGGTCTGCAACTCTTGCTCCTTTCTTGATAATGCACCCCTCTGTTC TATACCTCTATCTTATAACGTTTTCCGATGTTTCTGGATGTCTATGCAGACACCGATGGAAAATTTGGAGCCTATTCTGA GAGAAGATATTCAAAAGGTGATATTTCCTTTTAATTTCTTAGCTTTCCCCATTTGTTTGGTTTCTTCCTTGTTTTCATCA CTTTTTGACATTGTATGCATTCTTCAGATTTGGGATGCAGTTTCAAAACCCCAAGCTCACAAAAATACTCCTCTCAGTGA ATTTTTTAATGTAAGAAGATCTATCCAAGATCTATCCATCTACCCTTTTCTCATACCTCTTTAACTGTTTACTTATATAC TCCGGTATTTGATTATTCTCTCTTCAAATGAAGGTGGAGGTTACTGGATTGTCAAGCTATGAGGACAAGGAGGATAAGTT TAAGGAGGAGGTACCCTTTCATGATCCATTTCTTTTAGGAATTTGTTCATTCTGCAGTGATTTCTAAGTTCTATTGCTTT CAGACTTGGTTCTTTTGATTGATTATTTTATGCCAATAAATATTTATGAAAATATTGAAATTTTGAAGATTCCTGCAAAT ATTGAAAATTTCCATCTTGTGTTCTTTCATTATCTGGGCTATATGGTGTAGATCAATGTTGTACTTTCTCTTCTCATTCA GGTTGCTCAATTAAGGCAGCGTTTCTTCCATTCTGTAGCGCCTGGAGGCCTTGCCGGTGATCGGCGTGGTGTTGTGCCTG CGTCTGCTTTTTCCATTAGTGCACAGCAAATATGGAACGTTATACGAGAGAACAAGGATCTTGATCTTCCGGCTCATAAG GTTTCCTATTATGTCATTTTTCAGATGTAACAGTGGTTTGGTTTTCTTATCAATTTGTCATTTTTAACAGGTAATGGTTG CAACTGTGCGTTGTGAAGAGATAGCTGATGAAAAATTCAGTCATCTACGTACTGACGAGGTGCTGGTCCATTTCCCCTCC ATTGTAACTTTGTATGTTGCACCAGTTTATTTTTAAAATCAGTCATCACATGAATGGATTTGGTTTAGGGTTGGTTGGAA TTGGAGGAAGCTGTTGAATCAGGCCCCGTACGAGGTTTTGGGGAAAAGTTGAGCTCCATTATTGATACCTACCTTTCTCA GTAAGTTCCAGATGCTGTTTTCAGTCTAAGAAAAACTTATGTGCAATAACTACTTGATTTTCTGTTTAATTTCTGAATTA AATCAGTTTTCCCCCAACTCCTATAACTTGTGTATGTTTTATGGGTCATTGAAGAAATGTGATTTTTGAATTAAATTGTG GTGCTTTTTTTTTCAGGGGGGATTACCCAGGAGATTTTCACTTCTTTGCTAAATCTATTTACCCTATTTGGAGTTTTCTT AAGTTTTGCAATTGTGTACAAACATACATGTTTGAACAATAACATTACCAATAAAAGAATGAAAAACCAACAGATTGCAG AGTGCATTTTATGTGCATTTCTCCTTGGAAGCTTACAAGGATGCAACTAGTCATTAAAACTATTTTTTTCCTAAATTTAT GATGACGGTGTTAATTTGGTGTATAATAGTTCTAGATTATTTAATTGTCTGCTAAAGTTTTAAACTTTCCTTTTCATATG TTGATAATATATGCTTTCAACAGATATGATGAGGAGGCAATGTTCTTTGATGAAGCTGTGAGAAATGCAAAACGAAAGCA ATTGGAATCAAATGCATTGGATGTAAGGCTGCCTGCTAGTTTTTTATGGCTTTATTTCTAATTATAACTTTGACTTTTGA CTCCTTTGGGCTGAATTTTGATAAAGCAGCTATGGGATGTTGAACTGAACTCAAGTCTCTTTGAAAACCTCAAGCTAAAA TGCAATGCAATTTTTTTGTTTGTCAACTTTTCAGTTTGTACACCCTGCTTATACAACAATGTTGGGGCACCTACGTTCTA AAGCTCTAGATGATTTCAAGACTAAGCTGGATCAATCACTAAACAATGGTGAAGGGTTCGCTTCATCTGTTCACAGGTGG ACTCAGTCTATTATGCTCGAGTTTGATAAAGGATCTGCTGGTAATTATCAGATAGGATTGTTCTAAATAGCTTATGTATG ATCACCTGTTATTTATATGCATGTTTCACAATTAACCAAAAATTGGGGTGCCAATGTTAGCTTGAGTGTCCATTTGCTTT TTGAGTTTATATTAGGTGTCATTCTCTCCCTGCCTTTATTATTTTAAGATGTACATTTTCCAATTAATTATGATTTGCAA TTTTCAGACGCTGCTATAAGACAGGCCAATTGGGGTGCTTCAAAAGTGCGAGACAAACTTCGTCGAGATATTGATTCACA CGCTTCATCTGTGCGCAGTGCAAAATTATCAGAGATAATGACTAGCTTTGAGGTGATATTGTCTCAAAAATGGAGATTAA TTGGTTGAGCTGAGTCATATATTATTTATTCCTGCAATATATCCATCAACCACTAAATTAGAAGTATCTTTTGCAGACAC AACTAGTCAAGGCATTGGCTGAGCCTGTTGAGTCCCTCTTTGAAGCTGGGGGAAAAGACACTTGGCTTTCTATCAGAAAA CTTCTTAAACGTGAGACTGAAGCTGTTGTATCAAAATTTTTAACTTCCATTGCTGGTTTTGAGCTTGATGAAGAAACAAT TGAAAGAATGCAACAAACCTTAAGGGACCATGGAAGAAAAGTGGTGGAAAATAAAGCAAGAGAAGAAGCTGGAAAGATTC TTATTCGCATGAAAGATAGGTAACAGGGTTTTAAAGATATCTATACTCATCTATTTGGTGAATCTTGGGTTTGCATTATG TAAATTGATTGATTGATTTAACTCGGGGGTTGTAAGGATTGAAATAAGTCACGATGCTCTGCTAATTTTTGTATTCATTG ATGCCTTTTGTTGGGATCGAATACCAGAAGCACAAGTTTCTGTAGGTTTGATCACATGAAGTTTTTAGGTATTGTACTTT GTTCTGCTAATGGGTGATTTCCAACCGTTTATTGGTTAGACAAGCAGAGAGACAGAAGATTTGCATTTATCTGATTAGAG CAGTACAGAAAGACTTGAGAAAACTTAATGGGAAACCCATAAAAAAGGTGTTGCTTTAAATGGTTTTACACCTTAGATTT TGGTATTTGAAAGAGATCCATGTAACTGATCCAATCAAACAATATAAGGCTTGGTTGTTATTTGTTTCCATTTGTTTGTT TTGGAGGACACCCTTTGTTGTACTTGGCACTTTCCCTTACTTTTATGATGAAAGAAATTGCTCTATTCCTGTTTGATGTT ATTCAACTTTCAGATTGATTTGGTGGCTTACTGGCTTCTGTAATCAATTTCAGGTTCTCCACAGTATTCAATCATGACAG TGATTCACTACCTAGGGTTTGGACTGGGAAGGAAGATATCAGAGCAATTACAAGGGATGCTCGCTCTGCGGTAATTGATT GCAACTTCAATGATTAATTTTCAGCTTGCTCATACCTGAAATTTTACTGGAAATAACTTTTTTAGCACTATGTAAAATAT CTTCTTCTGCCATGTATCAGTCGCTGAAGCTTCTATCAGATCTGGCTGCTATACGCCTGGATGAGAAGCCAGATCGTATT GAAAGTGTACTTCATTCATCGCTCATAGATAATAAAACTGTTACTGCATCATCTTCACAATATACAAGTAGAGAAGCTTC TGTGGATCCTCTGGCTTCAAGCACGTGGGAGGAGGTAGTATATAGTGATATTTGTGATTCCCTGATAGTGTTGCAATCAT AATTTATATTTGAGAATCTATATAAAAATGTAGGTTTCTCCTGGAGGTGTACTTATCACTCCAGTGCAGTGCAAGTCTTT GTGGAGACAATTCCAGGGTGAAACTGAGTATACTGTCACCCAAGCTATTTCAGCTCAGGTAAAATCTTAAGATTATATTC TTGTCCACTTTGTTCTCTTTCCCTTTAATAATTCAAATTTTCTGTAGTTTTACCCAACTATTCTGCAGTTTATGTTAGAG ATAAGAAAACATTCATGTGCCTTGATCAACTTAATCTTTTTGATAATTGGTCATTGGATATGGTACAATGGCCTTATGAT TGTGTGATTAGGAGTTCAATCCTTACCACCCCTTTTTCTGAAATGAAGTTAAAATTCAATTAAAAGTAGAGTGGGCATAT GCATTGTCCATGTTTCAAGGGAAAATAATTTGTGTGTTAGGGGGTATGTTAGAAATATAGAACCATTATGTACTTTAACC TAACATCTTAATTTTTTTGGAGAGCTTTTCCATGAAAGTATACAAAATTGAATCATCAGGCAGTTCCACAAAAGTTATCC TGTAGTCAAGTATTAAATCATTTTTTGTCCTTTTGTTTTATTTAGCTACCTATTCTATGAAAATGCCATTCTTGTCCTTT CTCTTTGCCATGGCCCTTTATCTAAATCCAGGTATACTAACTAAGGAGTTATTTCCTTTTCTTTTTGGTTCTGGATTCAG GAGGCCTACAAGCGAAGTAACAATTGGTTGCCTCCTCCATGGGCAATCATGGCAATGGTCGTTCTTGGTTTTAATGAGTT CATGTTGCTTCTAAAGTAAATATCACTTCCTAAATCTTGAATTATTTCTTTATTGGACCCCTTTTCCACCAGTTTAATAA TTACATCTGCTGACTTGTATGTGAAACAGGAATCCTCTCTACCTGTTGGTTATATTTGTTGTTTATCTAGTCGTAAAGGC CGTTTGGATACAAATGGACATAGCTGGAGAGTTTCGACATGGCGCTGTGAGTATGGATGGACTTTTTATTTTGTTTTACT TTACCAGCAGGTGGATGCTCAAATTCGGGGCAATGGTATTTCTGTATTCTTACATTCATGCTATGGACAACACCTTAACA CAGGCACTAAATTGTTTATCGTGTCAATTTTTTCAAAATAACAACATTGTACAACGCAAAAGTTCTGCTATTAACTAAAT ATATGGTCAGTAGGGTTTGCAATTCGAACTCTTTTTTTCCTGTTGAAGTTGTTTTCTTGGAAGTGAATTTTGAAGTAGCA GTGATGAATATAACATAAGAGATGGTTGAACGATTCCAGCTACCAAGATGACTAGCCCTCTCTTATTTTTGTTTATTTAT GTTTTTTTTTGCAGCTACCTGGGTTACTCTCCATTTCATCAAAGTTTCTTCCCACAGTCATGAACCTTCTTAAACGTCTA GCTGAAGAAGCTCAAGGGAATCCAGCACCTCAAGGAACACAACCACAAAGTTCAGCAACTCAGATATACAGAAATCAAGT GCAAAAACCTGATCGAGTATCAAGTTCAAATTCGGCTGTGTCTAGTGTTAGCTCATCTGGAGATGATAGTGAATACTCAA CGACAAACTTGTCTCACAGGCAAAGAACAAACGTTACAGAAGTTGAGAAAATTTAAGTTGAAGTTGGCATCAGAATAGAT TATCCACTAGTTAGGGTGCTTACCCAGATAAGTTTTGTATTGTATTTTTGCTTTCGTTTACTATAGTGTAAATTGATCTG ACTATGTGAAGGACCCCTATTTGGGTTCTACTTCAAAATATTATCCGTCCTATAGTGACTGAATATAGTACTGCAAACTA ATTCTCCTTTGAATTTTAACAACTTTAAAATGTTGATATTCTGATGAATTCATTAATGCAGCAAAGGACCACTTTTGCCA
CDS sequence (LotjaGi6g1v0274800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGGAGAGGGGATGATACCGCTTTTGAGAAACAGAGCGCTCTTTTTGCTTTAGCAGTATCAGATATTGTTCTGAT AAACATGTGGTGTCATGATATTGGTCGAGAACAAGCAGCCAATAAGCCTCTTTTAAAAACAGTTTTTCAGGTGATGATGC GTTTATTCAGTCCCCGCAAGACAACATTGCTTTTTGTTATTCGTGATAAATCAAAGACACCGATGGAAAATTTGGAGCCT ATTCTGAGAGAAGATATTCAAAAGATTTGGGATGCAGTTTCAAAACCCCAAGCTCACAAAAATACTCCTCTCAGTGAATT TTTTAATGTGGAGGTTACTGGATTGTCAAGCTATGAGGACAAGGAGGATAAGTTTAAGGAGGAGGTTGCTCAATTAAGGC AGCGTTTCTTCCATTCTGTAGCGCCTGGAGGCCTTGCCGGTGATCGGCGTGGTGTTGTGCCTGCGTCTGCTTTTTCCATT AGTGCACAGCAAATATGGAACGTTATACGAGAGAACAAGGATCTTGATCTTCCGGCTCATAAGGTAATGGTTGCAACTGT GCGTTGTGAAGAGATAGCTGATGAAAAATTCAGTCATCTACGTACTGACGAGGGTTGGTTGGAATTGGAGGAAGCTGTTG AATCAGGCCCCGTACGAGGTTTTGGGGAAAAGTTGAGCTCCATTATTGATACCTACCTTTCTCAATATGATGAGGAGGCA ATGTTCTTTGATGAAGCTGTGAGAAATGCAAAACGAAAGCAATTGGAATCAAATGCATTGGATTTTGTACACCCTGCTTA TACAACAATGTTGGGGCACCTACGTTCTAAAGCTCTAGATGATTTCAAGACTAAGCTGGATCAATCACTAAACAATGGTG AAGGGTTCGCTTCATCTGTTCACAGGTGGACTCAGTCTATTATGCTCGAGTTTGATAAAGGATCTGCTGACGCTGCTATA AGACAGGCCAATTGGGGTGCTTCAAAAGTGCGAGACAAACTTCGTCGAGATATTGATTCACACGCTTCATCTGTGCGCAG TGCAAAATTATCAGAGATAATGACTAGCTTTGAGACACAACTAGTCAAGGCATTGGCTGAGCCTGTTGAGTCCCTCTTTG AAGCTGGGGGAAAAGACACTTGGCTTTCTATCAGAAAACTTCTTAAACGTGAGACTGAAGCTGTTGTATCAAAATTTTTA ACTTCCATTGCTGGTTTTGAGCTTGATGAAGAAACAATTGAAAGAATGCAACAAACCTTAAGGGACCATGGAAGAAAAGT GGTGGAAAATAAAGCAAGAGAAGAAGCTGGAAAGATTCTTATTCGCATGAAAGATAGGTTCTCCACAGTATTCAATCATG ACAGTGATTCACTACCTAGGGTTTGGACTGGGAAGGAAGATATCAGAGCAATTACAAGGGATGCTCGCTCTGCGTCGCTG AAGCTTCTATCAGATCTGGCTGCTATACGCCTGGATGAGAAGCCAGATCGTATTGAAAGTGTACTTCATTCATCGCTCAT AGATAATAAAACTGTTACTGCATCATCTTCACAATATACAAGTAGAGAAGCTTCTGTGGATCCTCTGGCTTCAAGCACGT GGGAGGAGGTTTCTCCTGGAGGTGTACTTATCACTCCAGTGCAGTGCAAGTCTTTGTGGAGACAATTCCAGGGTGAAACT GAGTATACTGTCACCCAAGCTATTTCAGCTCAGGAGGCCTACAAGCGAAGTAACAATTGGTTGCCTCCTCCATGGGCAAT CATGGCAATGGTCGTTCTTGGTTTTAATGAGTTCATGTTGCTTCTAAAGAATCCTCTCTACCTGTTGGTTATATTTGTTG TTTATCTAGTCGTAAAGGCCGTTTGGATACAAATGGACATAGCTGGAGAGTTTCGACATGGCGCTCTACCTGGGTTACTC TCCATTTCATCAAAGTTTCTTCCCACAGTCATGAACCTTCTTAAACGTCTAGCTGAAGAAGCTCAAGGGAATCCAGCACC TCAAGGAACACAACCACAAAGTTCAGCAACTCAGATATACAGAAATCAAGTGCAAAAACCTGATCGAGTATCAAGTTCAA ATTCGGCTGTGTCTAGTGTTAGCTCATCTGGAGATGATAGTGAATACTCAACGACAAACTTGTCTCACAGGCAAAGAACA AACGTTACAGAAGTTGAGAAAATTTAA
Protein sequence (LotjaGi6g1v0274800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGRGDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSKTPMENLEP ILREDIQKIWDAVSKPQAHKNTPLSEFFNVEVTGLSSYEDKEDKFKEEVAQLRQRFFHSVAPGGLAGDRRGVVPASAFSI SAQQIWNVIRENKDLDLPAHKVMVATVRCEEIADEKFSHLRTDEGWLELEEAVESGPVRGFGEKLSSIIDTYLSQYDEEA MFFDEAVRNAKRKQLESNALDFVHPAYTTMLGHLRSKALDDFKTKLDQSLNNGEGFASSVHRWTQSIMLEFDKGSADAAI RQANWGASKVRDKLRRDIDSHASSVRSAKLSEIMTSFETQLVKALAEPVESLFEAGGKDTWLSIRKLLKRETEAVVSKFL TSIAGFELDEETIERMQQTLRDHGRKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRVWTGKEDIRAITRDARSASL KLLSDLAAIRLDEKPDRIESVLHSSLIDNKTVTASSSQYTSREASVDPLASSTWEEVSPGGVLITPVQCKSLWRQFQGET EYTVTQAISAQEAYKRSNNWLPPPWAIMAMVVLGFNEFMLLLKNPLYLLVIFVVYLVVKAVWIQMDIAGEFRHGALPGLL SISSKFLPTVMNLLKRLAEEAQGNPAPQGTQPQSSATQIYRNQVQKPDRVSSSNSAVSSVSSSGDDSEYSTTNLSHRQRT NVTEVEKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 149 | 149 | 40.255 | ||
| Phobius | 1 | 579 | 579 | - | – | |
| Pfam | 4 | 677 | 674 | 8.6E-242 | ||
| PANTHER | 5 | 726 | 722 | 0.0 | – | |
| PANTHER | 5 | 726 | 722 | 0.0 | – | |
| SUPERFAMILY | 6 | 142 | 137 | 2.5E-5 | ||
| Coils | 115 | 135 | 21 | - | – | |
| Phobius | 580 | 599 | 20 | - | – | |
| Phobius | 600 | 605 | 6 | - | – | |
| TMHMM | 606 | 623 | 18 | - | – | |
| Phobius | 606 | 623 | 18 | - | – | |
| Phobius | 624 | 634 | 11 | - | – | |
| Phobius | 635 | 654 | 20 | - | – | |
| Phobius | 655 | 728 | 74 | - | – | |
| MobiDBLite | 661 | 728 | 68 | - | – | |
| MobiDBLite | 664 | 719 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0274800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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