Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0425400 |
| Transcript ID | LotjaGi3g1v0425400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ROOT HAIR DEFECTIVE 3 homolog; TAIR: AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3); Swiss-Prot: sp|Q9SSN0|RHD31_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 1; TrEMBL-Plants: tr|I1KGC2|I1KGC2_SOYBN Protein ROOT HAIR DEFECTIVE 3 homolog; Found in the gene: LotjaGi3g1v0425400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83473131..83483318) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGCACACCCACACAAGAAAGAAAAAAGAAAAAGAAAAAGAGGAAAACGAGTATATGTGTGACGTTATTATGCTATGC TAATGGCAATGGCCTTGTGACTCTGAGATCGCCCCTTCGTTTTCTCTTCTCTCATTCGATCTTCCTTGCCGCATTTCTCA ACACCGTCGCCAATTCCACGATAATGGGTACGAATTTTCAATCGCAATCCCCTTTCCCTTTTCATCGATCTGCATTTTCC ATCATTTTCTGATCAAAATTGTGTTCTTCAGTTATTGCTTTCTATAGTTTCAACTCTCATCGAAGTTTCAATCTTTTATA GAAGATGAATATTGGGTGTTAACCGAAACTTGCAGTTACACTTCCATGCGTTTTGCTTTTTGGCTTCATTTTTCTAACTC TCGTTTTTTCTTTTCTTTTATTGTTGTTAATTATGATATCATAATTAATTTTATACAGTTTTGAGTGATTATCTGTTTGG GATTTATTGCAATTGGTGATTTGATTAAGTGTGACAATTTGATTGATCCATAATTTGTGTTTTGTATGGCTAAATTGTTG GATCCTTTACAAGGTTTAGACTAAAATGCTTTTTGATTAAGGGAGGAAAATGAGTGAAGAAGAGAATGGCAATTATGTAT TAATCTAATTATTCTGTTGTATGCTTCTCAGCTGGAAGTATTGGGCTTGAACTGATGTGTGGAACCAGAAAACATGTATA AATTTTTTTTTTTTTCAAACCTGAGAATTTAGTTTTTCCGATTTTTCCCGAGTTCTCGTGTTTTTCATATGGATCTAATT AGTGGTTTACTTGAAATTTTTGCTGAGTATTTTGAATCTTTTCGCCTTCAACTAACAATGTGAGTGTTTGCTTATGCAGC GAATAGTGAGACTTCTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGCTTCTGGAATTGAAACCTTTATGA AGGAGGTGAAATTGGGTGAATGTGGGCTTTCGTATGCTGTAGTTTCTATAATGGGTCCGCAAAGTAGTGGTATGCTTTCT TGCTTTATTCATAATCGTATTGTTTCTTCTTATCTTCATAAACTAATTGGATTTAATGATTGTTTTTTCCGGTCTTTGCT ATAGAGGATTTTGATGTAATTAAGATAACTTGCTTGATACTATATACTGAGATGATTGTTATTTCAAATTCATGAAAAGG TTAAATCGAATTTGTACTTTATGAAGTAACGAGCAATAACGTCTAGTTGAATTGGACATAGATTTATGAATTCATTATCT ATTTAAAACGGTGATTTCTGGTGGTTTAGTCTCTTTATCCGTTTTCTCAAATCTTCTAAGAACTTCATCCTTTTTTCCCT ATTTCTTCTTCCATTTAAATTCAACTCATTTTATATTTGTTTCAATCTATCAGGATAGTGAGATGTGAGCTATTCCCAAT AAATGGATCTTTGAATTATCTAATTTGTTGTTTTCTTTTCTCTGGGCAGGCAAGAGCACACTATTAAATCATTTGTTTGG AACCAACTTCAGAGAGATGGATGCTTTTAAAGGAAGGTATGTTCTTACAAGTCTGACATGTCATATAAACCTTACTCAAT TAAAAAGGCCCTGATGTGATGTGCTTATTTTCAGGTCTCAAACAACCAAAGGAATATGGATGGCTAGATGTACTGGCATC GAGCCTTGTACAATTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGTGTTAATTTTTCCTCACATGTT ATACCTTGGATATTATGGTCTTGTTTGATCTATTAGCTGACCTCACCTAGTGGGAAAAGGTTTTGGTTGTTATTGTTAAT TGTTATACCTTTACTTTGATAATAACAGTGATGTTGATTCAGAGTATATTTCCAATATCCAAATAACATTGCATTTACAA TTTATAGTTGGAAATGGATATATGCCAATGTGTCTCTAGTCCCTATGAAACATAAAATATTTATTTCAAGATTTAACTGT ACCATCTATTTGTTTTTCCTCTTTTTACTTGCAAAGTAATGCCCTTTTTTTCCCTCTCTCTCTCTCTTCAATGGAAAACG TGAAGTGCAAGGTTCAGTTATCTCCCTGCCCCTGTACTTCATATGCTTACAAGAAAAAAGAGTTTCATAATCATTATAAT CCTGTGTTTGCTTTATGATGGGTTAGGAATAGTTAATATTTAATAATTAGGACTTAAGATTCTTTAAACCAGAAATCTCT GTCATTGGCAAAAATCTGAACAAAGGATGAGAAGTGGATAGTTTTGTGGTTGTTTCCGTGTATACTGAAACTGTCTATCT CTCAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTGTTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGA GTTTTTCCTTCTTTTCAATGAGACATCTTTAATACAAGCTAGTTTCAGAAAATTTGATGTCTGTTTAGCTGCTTGTACTT CTTGTTTGATGTTTTCCAGTTGATTTTCTTTCTTTATGCATCTAATTTTTTTCTGTATGAAATGCTTGTAAAGGTGGTGC CATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCGCTTTTGAAAACTGTCTTTCAGGTATCTTTTGTCAGCCTTTTGAC TACGAGCAGTTTTCTTGAATCTCAGAGTTGTCATATATCTAGTTGCATGCTTTCAGGTCATGATGAGATTGTTTAGTCCG CGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGGTGAGTAAGCAAATAGCTTTTTCTTGTTTTTATTTATT TTTTATTTTTCAGTCATTATTTTTAAATTCTGTACTTTTTTTTATTGGTTGTTGATGTGGTTATACTTTTCCCTTTATAG ACACCACTCGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAAAAGGTAATGCAGTATTTTCATCTTCATTTGATGTT TTTTGAGTTGTGAAGTAATTTTTGCCAACCTCTCTTACTTTACTTATTTTTCCTGCAGATCTGGGACTCTGTTCCTAAAC CACACGCCCACAAGGAAACCCCTCTAAGTGAATTTTTCAATGTAATTTTTTCCTTCTTTGACATTGCTTATCTTATTGAT GTTCTTCGTCGTGCATTGCAGCACTTTATTGGTAATTTATATTAATTGTTTGCACTTGGCAATTACTGCTCAGGTTGAAG TTGTTGCACTTTCTAGTTTTGAAGAGAAGGAAGAACAATTTAAGGAGCAGGTATGATTAGTGCACCAGTTTCGTTCTGGT TTACTTGTTGAAAATGAGCATTATCAGGATTTGTGGTTGTATACATTTCAATATCTGCACCTGTAACTGTTGGTTGTAAC TTGTAACTCAATCTTTGTATATAAATTATTGTATTTATTTGGCTTTCATATTAAGAATAGATATTTTTGGTTTATTGAAT ATCTCTTATTCTCTAATATGAATATTGTTTCTGTTCTGATTTATTTTACATGTAGGTTGCTAGCTTGAGGCAACGTTTCT ATCATTCTATCGCTCCTGGTGGGCTTGCAGGGGACCGTCGTGGAGTAGTTCCTGCCTCTGGCTTTTCTTTTAGTGCTCAG GAAATATGGAAAGTCATTAAGGAGAACAAAGATCTCGACCTTCCTGCACATAAGGTAATATACGGGCTAGAGTCATGCTT TTTTGTTCACATGTATATTGATTTCATTAACCATTGAGGGTACGACTCCCTTGTAGGTTATGGTTGCTACTGTACGATGT GAAGAAATTGCAAATGAGAAATATGTTTCTTTTTCTGAAAATGAGGTATTAAATTATATTTTCTTCTCTTTTTCATACAT TTTTTGACACTCTAAACTACTAATTCTGTGGAAATTGCTTTCAATCATCACTTAGGAATGGTGTCAATTGGAAGAGGCTG TGCAATCTGGCCCACTTCCTGGATTTGGGAAAAAGATCAGTTCACTCCTTGATGCTTATTTGTCAGAGTAAGTAGAGTTT AATTTGTGTGACGTCTATAAATGTTAATGGCCCAATTTGTTAGTTTCATGTATGGCATTACATAGTAATACCATCTAATG ATTTTAGGTTTCTCTTCCAATCCTTACACATACACAAAAATGGTGTCAAGGGTCTTTACCTCATCTACTCCTATATAATA TATTTGTGTATATCTGTTTTATACTTTTGAATATTTTATCTCTAAAATATTTTCTCTTAATTTATTTTTAAAATTTTAAA AGACCGTCAATGGATGAGATGCTTATCAGTTATTTTGTATGTCAAAGACCAATTTTATTGCTGTGATGTTATTTGTAATC TTCAAGTAAACTGTGGCATTGTAGAAAATTTTAGAAGTGTGCTGTCTTGATCTTAGGTGCATCATGCAAGAATGAGTTGA TTGTGGACAGAAGGTAAATTGAGCTATTGCATTTTCTTTTAATCTAGGTATGATGCTGAGGCCACTTATTTCGATGAAGG TGTGAGATCTGCAAAACAAAAGCAACTTCAAGAAAAACTGTTGCAAGTAATTCTTCTTAACTTGGCTCTTGTGTAATCCA GGCTTGTTAATAGCGCGCTATAGCTGCGCAATAGCCTATAGCGTAGCGCCCTGGGGGTTCACCGCTACTCCACTATTTAC CGCTATTTGCGCTATTTGCCGCTATAGCGCCGTAATAGCGCTCGAAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCT ATCCGCCATTAACAACCCTGGTGTAATCATGGTTGTTAAACCTTTTTCTTTTTCATGAACATAAGTAAATTTACATTGTT GAAAGAGAAACTCTATTTTTTTGATTATTGAATCAATAATGAATGGCCATTTTAGATTCGGGATTATAGGATTTATCTTT TTTAAATTTTACTTAAAGAAGCTTTTGTAGATTTTTATGATGATTAATAAGGTTTATGATGGAATACCTTTTCAATTGGT TAGCTTGTCCAACCAGCATTCCAATCTGTGCTGGGACATCTAAGATCAGGAACTTTTGACAAATTCAAGGAGGCATTTGA AAAGGCTTTAAATGGAGGGGAAGGGTTTTCTACTGCTGCTAATAAATGCATCGGGTCTTTTATGGCTCAATTTGACGAAG CATGTTCAGGTAATAAATAAAATGTGTATTCTGTCTGTTAACTAGTGGGTAGTGAACAATAAATTATGTTGAAGCCTATA ATGAATACCATGGAAAGGGGAAAAAAGAGTATTTGGATAAACAGGTAGTAAAGTAGACTGCGTTTGTGTAAAATGATTGA TTTGGTGCTGGGAGCAGAGTTGCTGGGATTTGGTTCATTCCAGTGATCTACTTTCTGAGAAGTTAAACTTGATAATATTT GTTGCAAGTATGCATCATACTTGCTTAACTAAATTACAACATGAAACTGATTTACTATCATTGCAGATGTTGTTATTGAA CAAGCAAACTGGGATACATTTAAAGTACGGGAGAAATTGAAGCGTGATATTGATGCACATGTTGAATCTGTGCGCGCAGC TAGAATATCAGAACTTACTTCTTCATATGAGGTACATATCTAGCATTGATTATTCATGTCTTATGAATCTTTAAGTGATT ATCTTCAAGCTCAATAATGATGCTAAGATCTCAGATTATACATGTTTGTGCCAAAATTTCAATGTTGAAATATCTAGCGT GGTAATGAGATAGTAGTCAATAGCGCTATAGCGCCGCTATAGCGGCGTAGCGGAGCGGTTCCCTGCCTCTATTGAGATGA AATAGCGGCGCACTTCACAATAGCGGCTGTAGCGGCCAAAATAGCGGCAGTCGCAGCCAATAGCGGGAAATAGCGGCGCT ATATGAACGAAGGAAAAAATGACTCAAGCCCCTTGGTTTTAAATCGTTGGGGAACCTTTTTAGGGGCATGTTAGGACTTC TCAGGGCCATTATAGGTTAAACTTGAAAGAATTAAGCTTCATTCTTCATTCAGATTTGCACATTCGACTTCTTTACCTTG CTTTTGAGTGGTTTTTAGTTGTGTTATTGTTCAAAACTTATGATATTTATTTCTATTACGAGTGTTATGAATTTTAGGCA ATATTTGACATTGTTTGCTATTTATATGTATATAGTATTAAACTATTAATTATATAAAATTATATATAAAAAATCTGAAT AGCGGCCAGCCCGCTATGCGCTATCCCGCTATCCGGGACTGACTATGAGACTAAAACTAAGAAAGGATCTCTTCTGGAAA TATATCCATGAGAAAGGGATAGATAGAAATTTGATAAGTGTGCATTGGCAATACATTGTCTATTAATAATGGCAAGCCAA AAGTGTAACATATTGTTCATACTTAGTGACTGTGATTTAGGTAATTAGTTTATGAATTTTTAGTGAGTTGTGTTGATCTA TTTGTTTCTATTTTCAAAAGTTCAAAGACTGTTCTTGGGAAGTTATCTGATAGTGGTAATGTTGCAGGCTAAACTTAAAG AAGCTCTGTCTGGATCTGTTGAAGCTCTTTTGGACGGTGCTAATAGTGAAACTTGGCCATCAATAAGGAGCATTCTTAGG CGGGAGATTGAATCAGCAGTTTCAGGGTTTTCTGCTGCACTCACTGGGTTTGATATGGATGAAGAAACGAGACAAAAATT GATTTTGAGTTTAGAGGACTATGCAAGGGGTGTGGTAGAAGGAAAGGCTAGGGAAGAAGCTGGAAGGGTTCTCATCCGTA TGAAGGACAGGTATTAACCGTCTGCATCGTAGTTGACCTTTTACCTCTTCCTTCAAGTCTTACTTTAGAGATACTTATCT TAAATTTGAAACAGGTTTACGATGTTATTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAAAGAAGATAT TCGAGCCATCACCAAAACTGCCCGCTCTGCTGTATGACATGATCATGAATATTATTTTATTAATTTAGTTTGCATTGTAG TTTATCTTTTAAACCAAATTTAATCCTTTGCAGTCTATGAAATTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGC TGATACCGATAATATCGAGAAAACATTAGCAGTTGCATTGTTGGATTCATCGAGCAATGCTGCTAAAGATAGGAGTATCA CAATGGTTGATCCGCTAGCTTCTAGCAGTTGGGATGAGGTGCATTTTCATCATTGATACTTCTAGTTCTATTTGATTAAG TGGTAAATTGTGTACTCATCTTGGGTAAATGAGTGATCTGATTGGCATCAATTAAAAATTTGATTTCTTAAGAATGTATA TCACTCTAGCAATATTTACGTGAACATAAATTTTGGGCCACAAAATGCTATATTTTGGTTCCTTGTATGATGTTTAGGAA CATTTTCTAGCTTGAGAGCTGATCACTTGTTGTGATCGAATTTCCTATGCAGGTTCCATCCTCTAAAACATTAATTACAC CTGTCCAGTGCAAATCTTTGTGGAGGCAGTTCAAGACAGAAACAGAGTACAGTGTCTCTCAAGCCATTTCTGCTCAGGCA TGGTGTTTCCCATTTTTTATTTTAGATTTTAAAGGTTCCTTTATGCATGGGAAAAACAGAAAATATGTGATGAGAAAATT TAAATGCTACACCTTTCTTTTGAATATCTATTTTAAACATGTAGCTGAAGCCATCTGGTTCAATTGTGTTAAAAAATGAG GCAAGGCTGTGTTTTTATATTTTCATGTATGTTTCCTGTATTTGTGAAGTTGTTGGCAGTTGGCACGGTCCCAAGGGCTA TAAAAAATCAATTTGATGCACATTATGGATGCATATGAATCATGTTATCGTTGAGAAATGTGTTACTAAATTTTACTTAT TGATGCAATACCTTTTACATTTTCAGGAGGCCAACAAGCGCAATAACAACTGGTTACCTCCCCCATGGGCAATATTTGCT TTGGCTATTCTGGGTTTCAATGAGTTTATGACACTTCTAAGGTGCATATCAACTGTACTCATCTAATGTCTACTTTTCAC TTGCTCTTAGCTCTGCATCCCTCCTGTATCAGCTGCGCAATGTAAAAGTACTAAATATGTATTGGACATAAAGTATTGGA TGGGCATTTTAATAACTTTTTTTTTTTTGCTTAAAGCTCAAACCTAAAAAAAACCCTTCAGGTTTGTTGTATTATTCAAT TGATCTCACACCAAGTTTGGTATTCTATGTGGCAGAAATCCCATGTATCTGGGTATCATCTTTGTTGGTTTTCTTCTTAT TAAAGCCCTATGGGTGCAGCTTGACGTTTCGGGTGAATTTCGCAATGGAGCTGTGAGTATAATTTATTGCAATTTATAAT TCATTGTTGAATGTCAATATTCATGATTATTGTGTGTCTCATGCCTGTTGGAGTTTGGTTGCGACTTGCAATCTGTAATC AGCAGTAGCAAGATCATCTAATTAGCTACTATTCATTCATAGCATGTTCGGATTAACTTCTCTTTCATCAGAACCAATTC TGAAATCTAGAAGCTAGTCACCAAAGCTTCTCCCCATAATTAATAGACTTAAGATTCAATTTTAGAAGGATTTTCAAACA TGCATTTAGTGTGGTTCACGTGTGAAGTAGCTCTTTAGTTAATCTGTCTCTTGCTAACTGTTCATTATCTGTAAAGCAGT CTTATTTCTAAGTTCCTTGCTTTCAGCTTCCGGGAATCATATCTTTGTCTACCAAATTTATTCCAACTATCATGAACCTT ATGAGAAAACTAGCCGAGGAGGGACAGAACCCTGCAACTAACAATCCTCAGAGAAACCCATCAAGAAGCAATCAAAGTGA TGGTCCTGCTGGTAGTTCTTTGTCATCTAGCGCTTCATCTAACGTAACATCATTGGACAACGGAACTGGATACGCCAGCT CATCAAAAGACGAGTAGGCGAAGAAAGTCATTTTTCTGAATAACAACTTCTGCTGTTTGAAAAAGGTTGTGTCTGCTGGC TGCATGATGGGTTTTTGCTTGTCCATGAATTTATGACTTGTGAGCTTTCCAGACATTCAAAGGCATCAGTTTTTTGTGCA AGTGCCATACACAGGGGGCAATGTTTTGATCCAAGGTAGGTCCCCTTGAAATAGGTCCTTTTTTATCTTTTCAATTTGGG TGCTCCACATAGTTGGAGATGTTAGCTCATTTCACGTGTTGTCATTGATGGTTGTGCTGGTTTTGCAATCAATTTTGTTT GTATTTTTATCAGTTTTCTGAATGTGTCCTTTCTATTTAGAGAATTTATTGATTGGACTCCTGTATTTATATTAGGTTTA TAAGATTATACATGTAAGCCTCATGTATAATGGGCAACCGACTGTCCATTCACGTGTAAGTGTTGAAAATAGGAGATTGT TTTGGTTTTTGGCATGCTTAAACATGCATTGAATTGAATCAATTAAAAGTTCAGTGTTATTTTCAGCTTGCACTTAGAGC CCGTTTGGAACGTGCTTATTAGAACTTATGTACTAGAAAATGCACTAAACAAGTTTCAATACATGTTCTTTGGTTTGCAT CGAAACGGCTGGAACTTTTAGTTACACTTATACTAAGTATAACTATAAGGGTTTGAGTCAGTATACAACATTTATGTTTT TTCAGAAATTTAGATTTTGTAGGTATGGTTCAGGCAATTGGAATTTAAAGCCGTGGTCCAGAATTTGTACGTGACACTTA GTTTTGACATCGACCTTTGTTCCACAGTCTTCTATATCTCTCTCATTTTTATTGCGTAAAAGCAACATGTCATGGAACAA TAGCAGAATTTGGGTCCATAATATATTAATTGGGTCGTGCAAACACCACAGCGGAATTATAAAAAAGCGATTGGTATTTA AATGGTTTGTTTGGTTATCACAAAGAAAGATTGCTTGATGGGTAATGTAGGTATCTAATGTTTCCTCATTTGGATGCAAG TAAATGAAAAGTTGAACAAAGAATTCATTAGTTGTAAGTGAAGAGTAATGATTCTCTCGGACCCCATAGCTATCTTTGTC TGGATTCCAGTCAAACAAAAATGCTACTAAATTTAATTAAAAAACTTGTGAATTTTGTAATACTTCATTAATATTCTATT TCCTTTCATTTTGATTATTCCCACACAATGAAAAACCCAATTCTCATTTTGGGCGCATCCAATTTGATATGTAAGCTTGT ATCATTTTGGAAAAGCTCTTGTCAAAAT
CDS sequence (LotjaGi3g1v0425400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAATAGTGAGACTTCTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGCTTCTGGAATTGAAACCTT TATGAAGGAGGTGAAATTGGGTGAATGTGGGCTTTCGTATGCTGTAGTTTCTATAATGGGTCCGCAAAGTAGTGGCAAGA GCACACTATTAAATCATTTGTTTGGAACCAACTTCAGAGAGATGGATGCTTTTAAAGGAAGGTCTCAAACAACCAAAGGA ATATGGATGGCTAGATGTACTGGCATCGAGCCTTGTACAATTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGG AGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTGTTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGT GCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCGCTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGT CCGCGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGACACCACTCGAAAATTTAGAACCTGTTTTGCGAGA AGATATTCAAAAGATCTGGGACTCTGTTCCTAAACCACACGCCCACAAGGAAACCCCTCTAAGTGAATTTTTCAATGTTG AAGTTGTTGCACTTTCTAGTTTTGAAGAGAAGGAAGAACAATTTAAGGAGCAGGTTGCTAGCTTGAGGCAACGTTTCTAT CATTCTATCGCTCCTGGTGGGCTTGCAGGGGACCGTCGTGGAGTAGTTCCTGCCTCTGGCTTTTCTTTTAGTGCTCAGGA AATATGGAAAGTCATTAAGGAGAACAAAGATCTCGACCTTCCTGCACATAAGGTTATGGTTGCTACTGTACGATGTGAAG AAATTGCAAATGAGAAATATGTTTCTTTTTCTGAAAATGAGGAATGGTGTCAATTGGAAGAGGCTGTGCAATCTGGCCCA CTTCCTGGATTTGGGAAAAAGATCAGTTCACTCCTTGATGCTTATTTGTCAGAGTATGATGCTGAGGCCACTTATTTCGA TGAAGGTGTGAGATCTGCAAAACAAAAGCAACTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCAATCTGTGC TGGGACATCTAAGATCAGGAACTTTTGACAAATTCAAGGAGGCATTTGAAAAGGCTTTAAATGGAGGGGAAGGGTTTTCT ACTGCTGCTAATAAATGCATCGGGTCTTTTATGGCTCAATTTGACGAAGCATGTTCAGATGTTGTTATTGAACAAGCAAA CTGGGATACATTTAAAGTACGGGAGAAATTGAAGCGTGATATTGATGCACATGTTGAATCTGTGCGCGCAGCTAGAATAT CAGAACTTACTTCTTCATATGAGGCTAAACTTAAAGAAGCTCTGTCTGGATCTGTTGAAGCTCTTTTGGACGGTGCTAAT AGTGAAACTTGGCCATCAATAAGGAGCATTCTTAGGCGGGAGATTGAATCAGCAGTTTCAGGGTTTTCTGCTGCACTCAC TGGGTTTGATATGGATGAAGAAACGAGACAAAAATTGATTTTGAGTTTAGAGGACTATGCAAGGGGTGTGGTAGAAGGAA AGGCTAGGGAAGAAGCTGGAAGGGTTCTCATCCGTATGAAGGACAGGTTTACGATGTTATTTAGCCATGATTCTGATTCA ATGCCTCGTGTTTGGACGGGGAAAGAAGATATTCGAGCCATCACCAAAACTGCCCGCTCTGCTTCTATGAAATTGCTATC TGTTATGGCTGCAATTCGTTTGGATGATGCTGATACCGATAATATCGAGAAAACATTAGCAGTTGCATTGTTGGATTCAT CGAGCAATGCTGCTAAAGATAGGAGTATCACAATGGTTGATCCGCTAGCTTCTAGCAGTTGGGATGAGGTTCCATCCTCT AAAACATTAATTACACCTGTCCAGTGCAAATCTTTGTGGAGGCAGTTCAAGACAGAAACAGAGTACAGTGTCTCTCAAGC CATTTCTGCTCAGGAGGCCAACAAGCGCAATAACAACTGGTTACCTCCCCCATGGGCAATATTTGCTTTGGCTATTCTGG GTTTCAATGAGTTTATGACACTTCTAAGAAATCCCATGTATCTGGGTATCATCTTTGTTGGTTTTCTTCTTATTAAAGCC CTATGGGTGCAGCTTGACGTTTCGGGTGAATTTCGCAATGGAGCTCTTCCGGGAATCATATCTTTGTCTACCAAATTTAT TCCAACTATCATGAACCTTATGAGAAAACTAGCCGAGGAGGGACAGAACCCTGCAACTAACAATCCTCAGAGAAACCCAT CAAGAAGCAATCAAAGTGATGGTCCTGCTGGTAGTTCTTTGTCATCTAGCGCTTCATCTAACGTAACATCATTGGACAAC GGAACTGGATACGCCAGCTCATCAAAAGACGAGTAG
Protein sequence (LotjaGi3g1v0425400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANSETSCSTQLIDGDGTFNASGIETFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKG IWMARCTGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFS PRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPHAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVASLRQRFY HSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYVSFSENEEWCQLEEAVQSGP LPGFGKKISSLLDAYLSEYDAEATYFDEGVRSAKQKQLQEKLLQLVQPAFQSVLGHLRSGTFDKFKEAFEKALNGGEGFS TAANKCIGSFMAQFDEACSDVVIEQANWDTFKVREKLKRDIDAHVESVRAARISELTSSYEAKLKEALSGSVEALLDGAN SETWPSIRSILRREIESAVSGFSAALTGFDMDEETRQKLILSLEDYARGVVEGKAREEAGRVLIRMKDRFTMLFSHDSDS MPRVWTGKEDIRAITKTARSASMKLLSVMAAIRLDDADTDNIEKTLAVALLDSSSNAAKDRSITMVDPLASSSWDEVPSS KTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAIFALAILGFNEFMTLLRNPMYLGIIFVGFLLIKA LWVQLDVSGEFRNGALPGIISLSTKFIPTIMNLMRKLAEEGQNPATNNPQRNPSRSNQSDGPAGSSLSSSASSNVTSLDN GTGYASSSKDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 679 | 679 | - | – | |
| PANTHER | 3 | 809 | 807 | 0.0 | – | |
| PANTHER | 3 | 809 | 807 | 0.0 | – | |
| Hamap | 9 | 762 | 754 | 19.433 | ||
| SUPERFAMILY | 10 | 249 | 240 | 5.85E-33 | ||
| Gene3D | 11 | 246 | 236 | 1.5E-23 | – | |
| CDD | 36 | 242 | 207 | 2.66533E-58 | – | |
| ProSiteProfiles | 37 | 252 | 216 | 72.377 | ||
| Pfam | 46 | 779 | 734 | 1.7E-299 | ||
| Coils | 218 | 238 | 21 | - | – | |
| Phobius | 680 | 699 | 20 | - | – | |
| Phobius | 700 | 705 | 6 | - | – | |
| TMHMM | 701 | 723 | 23 | - | – | |
| Phobius | 706 | 723 | 18 | - | – | |
| Phobius | 724 | 734 | 11 | - | – | |
| Phobius | 735 | 754 | 20 | - | – | |
| Phobius | 755 | 811 | 57 | - | – | |
| MobiDBLite | 762 | 811 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0425400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…