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IPR012816 is a NADAR.
<p>This entry contains E. coli swarming motility protein YbiA. Mutations in YbiA cause defects in Escherichia coli swarming, but not necessarily in motility. Members of this entry were predicted to be involved in NAD-utilising pathways, likely to act on ADP-ribose derivatives, and were been named NADAR (NAD and ADP-ribose) [[cite:PUB00079392], [cite:PUB00079393]]. More recently, YbiA has been shown to be involved in the disposal of riboflavin intermediates. It catalyses the hydrolysis of the N-glycosidic bond in the first two intermediates of riboflavin biosynthesis, which are highly reactive metabolites, yielding relatively innocuous products [[cite:PUB00086631]]. This entry represents the C-terminal domain of Riboflavin biosynthesis protein PYRR from plants, a pyrimidine reductase involved in the riboflavin biosynthesis pathway. It catalyses the hydrolysis of the N-glycosidic bond in the first two intermediates of riboflavin biosynthesis, which are highly reactive metabolites, yielding relatively innocuous products [[cite:PUB00158944], [cite:PUB00075557]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: riboflavin biosynthesis protein RibD-like [Cicer arietinum] gi|502105588|ref|XP_004492842.1| | 28 | ||
| – | Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|Q9STY4|RIBRX_ARATH Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|A0A1J7G1G5|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 | 30 | ||
| – | Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|K7WIZ6|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|I1N3Z5|I1N3Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 | 18 | ||
| – | Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|K7WIZ6|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|A0A1J7G1G5|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd15457 | CDD | 1 | 25.00 |