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IPR020578 is a Aminotransferase class-V, pyridoxal-phosphate binding site.
<p>Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [[cite:PUB00001654]] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.</p> <p>This signature represents a conserved region surrounding the lysine residue that binds the pyridoxal-phosphate [[cite:PUB00001654]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Cicer arietinum] gi|502153680|ref|XP_004509428.1| | 26 | ||
| – | PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Glycine max] gi|356538375|ref|XP_003537679.1| | 13 | ||
| – | PREDICTED: serine--glyoxylate aminotransferase-like [Cicer arietinum] gi|502126891|ref|XP_004499480.1| | 15 | ||
| – | Alanine glyoxylate aminotransferase [Medicago truncatula] gi|357459757|ref|XP_003600159.1| | 15 | ||
| – | PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cicer arietinum] gi|502135118|ref|XP_004502227.1| | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|A0A1J7HP55|A0A1J7HP55_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048200 | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|A0A0D2Q888|A0A0D2Q888_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0048200 | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|A0A1J7HP55|A0A1J7HP55_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048200 | 15 | ||
| – | Phosphoserine aminotransferase; TAIR: AT2G17630.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q9SHP0|SERB2_ARATH Phosphoserine aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7HEK4|A0A1J7HEK4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356200 | 24 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 | 15 | ||
| – | Alanine:glyoxylate aminotransferase; TAIR: AT2G13360.1 alanine:glyoxylate aminotransferase; Swiss-Prot: sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase; TrEMBL-Plants: tr|G7J013|G7J013_MEDTR Serine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0183300 | 15 | ||
| – | Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 | 15 | ||
| – | Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 | 15 | ||
| – | Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 | 13 | ||
| – | Cysteine desulfurase family protein; TAIR: AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase; Swiss-Prot: sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic; TrEMBL-Plants: tr|A0A151REY6|A0A151REY6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275200 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd06453 | CDD | 1 | 5.88 |