Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR021182 is a Protein SOSEKI, magnoliopsida.
<p>This entry represents proteins SOSEKI 1-5 (SOK1-5) from Arabidopsis thaliana. SOSEKI proteins (SOK1-5) integrate apical-basal and radial organismal axes to localize to polar cell edges and contain a DIX oligomerization domain that resembles that in the animal Dishevelled polarity regulator [[cite:PUB00096647], [cite:PUB00096646]]. SOK2 is also known as Protein UPSTREAM OF FLC (UFC, At5g10150) and is part of a three-gene cluster containing FLC, UFC and DFC, which is coordinately regulated in response to vernalization [[cite:PUB00073664], [cite:PUB00096645]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502145541|ref|XP_004506071.1| | 7 | ||
| – | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502145541|ref|XP_004506071.1| | 7 | ||
| – | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502145541|ref|XP_004506071.1| | 7 | ||
| – | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502145541|ref|XP_004506071.1| | 7 | ||
| – | Auxin-regulated protein [Medicago truncatula] gi|357472673|ref|XP_003606621.1| | 8 | ||
| – | Os03g0192300 [Oryza sativa Japonica Group] gi|115451275|ref|NP_001049238.1| | 8 | ||
| – | Protein upstream of flc; TAIR: AT5G59790.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|I1LQT5|I1LQT5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0369400 | 8 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|V7BW26|V7BW26_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0168900 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|V7BW26|V7BW26_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0168900 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203500 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.2 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203500 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203500 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0203500 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0402600_LC | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0402600_LC | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein upstream of flc; TAIR: AT2G28150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|K7LTP4|K7LTP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0485000 | 7 | ||
| – | Protein UPSTREAM OF FLC; TAIR: AT5G10150.1 UPSTREAM OF FLC protein (DUF966); Swiss-Prot: sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC; TrEMBL-Plants: tr|G7LAD3|G7LAD3_MEDTR DUF966 domain protein; Found in the gene: LotjaGi4g1v0400100 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.55 |