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IPR025715 is a Chromatin target of PRMT1 protein, C-terminal.
<p>This LDXXLDAYM region (where X is any amino acid) is duplicated in the C terminus of chromatin target of PRMT1 protein (also known as Fop), which are chromatin-associated proteins that co-localise with facultative heterochromatin and are critical for oestrogen-dependent gene activation [[cite:PUB00057915]]. The region also occurs in other proteins, including THO complex subunit 4 ([swissprot:O08583]) and RNA and export factor-binding protein 2 ([swissprot:Q9JJW6]).</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: RNA and export factor-binding protein 2-like [Glycine max] gi|356539036|ref|XP_003538006.1| | 14 | ||
| – | PREDICTED: THO complex subunit 4-like [Cicer arietinum] gi|502145107|ref|XP_004505883.1| | 14 | ||
| – | PREDICTED: THO complex subunit 4-like [Glycine max] gi|356569696|ref|XP_003553032.1| | 13 | ||
| – | RNA-binding family protein; TAIR: AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8L773|THO4A_ARATH THO complex subunit 4A; TrEMBL-Plants: tr|A0A151TMF4|A0A151TMF4_CAJCA RNA and export factor-binding protein 2; Found in the gene: LotjaGi2g1v0370700 | 16 | ||
| – | RNA-binding family protein; TAIR: AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8L773|THO4A_ARATH THO complex subunit 4A; TrEMBL-Plants: tr|A0A0L9UNH7|A0A0L9UNH7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0281400 | 15 | ||
| – | RNA-binding family protein; TAIR: AT5G37720.2 ALWAYS EARLY 4; Swiss-Prot: sp|Q6NQ72|THO4D_ARATH THO complex subunit 4D; TrEMBL-Plants: tr|V7D142|V7D142_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0056400 | 14 | ||
| – | RNA-binding family protein; TAIR: AT5G37720.2 ALWAYS EARLY 4; Swiss-Prot: sp|Q6NQ72|THO4D_ARATH THO complex subunit 4D; TrEMBL-Plants: tr|V7D142|V7D142_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0056400 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 14.29 |