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IPR025780 is a Histone-lysine N-methyltransferase ATX.
<p>This entry represents a group of predictive histone-lysine N-methyltransferases from plants that includes ATX3, ATX4 and ATX5.</p> <p>Methyltransferases (EC [ec:2.1.1.-]) constitute an important class of enzymes present in every life form. They transfer a methyl group most frequently from S-adenosyl L-methionine (SAM or AdoMet) to a nucleophilic acceptor such as oxygen leading to S-adenosyl-L-homocysteine (AdoHcy) and a methylated molecule [[cite:PUB00057957], [cite:PUB00057958], [cite:PUB00054125]]. All these enzymes have in common a conserved region of about 130 amino acid residues that allow them to bind SAM [[cite:PUB00006319]]. The substrates that are methylated by these enzymes cover virtually every kind of biomolecules ranging from small molecules, to lipids, proteins and nucleic acids [[cite:PUB00057957], [cite:PUB00057958], [cite:PUB00006319]]. Methyltransferase are therefore involved in many essential cellular processes including biosynthesis, signal transduction, protein repair, chromatin regulation and gene silencing [[cite:PUB00057957], [cite:PUB00057958], [cite:PUB00054125]]. More than 230 families of methyltransferases have been described so far, of which more than 220 use SAM as the methyl donor.</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] gi|356518627|ref|XP_003527980.1| | 31 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cicer arietinum] gi|502113957|ref|XP_004494815.1| | 33 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| | 30 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| | 30 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|A0A151TYG2|A0A151TYG2_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | 31 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0284200 | 38 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT3G61740.2 SET domain protein 14; Swiss-Prot: sp|Q9M364|ATX3_ARATH Histone-lysine N-methyltransferase ATX3; TrEMBL-Plants: tr|A0A151SIL1|A0A151SIL1_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi3g1v0394900 | 38 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 14.29 |