Domain Predictions — View

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cd15495

Source: CDD

Description

PHD_ATX3_4_5_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0062699.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] gi\|356518627\|ref\|XP_003527980.1\|	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.160 G3DSA:3.30.40.10 IPR000313 IPR001214 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 PF00628 PF00855 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50812 PS51566 PTHR13793 PTHR13793:SF5 SM00249 SM00317 SSF57903 SSF63748 SSF82199 cd15495 cd15517 cd15663	31
Lj1g3v5034780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cicer arietinum] gi\|502113957\|ref\|XP_004494815.1\|	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.160 G3DSA:3.30.40.10 IPR000313 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 PF00855 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50812 PS50868 PS51566 PTHR13793 PTHR13793:SF92 SM00249 SM00293 SM00317 SM00508 SSF57903 SSF63748 SSF82199 cd15495 mobidb-lite	33
Lj3g3v2441840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi\|356522510\|ref\|XP_003529889.1\|	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.160 G3DSA:3.30.40.10 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 PF00628 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50868 PS51566 PTHR13793 PTHR13793:SF92 SM00249 SM00317 SM00508 SSF57903 SSF63748 SSF82199 cd15495 cd15517	30
Lj3g3v2441840.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi\|356522510\|ref\|XP_003529889.1\|	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.160 G3DSA:3.30.40.10 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 PF00628 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50868 PS51566 PTHR13793 PTHR13793:SF92 SM00249 SM00317 SM00508 SSF57903 SSF63748 SSF82199 cd15495 cd15517	30
LotjaGi1g1v0226000_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp\|Q8GZ42\|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr\|A0A151TYG2\|A0A151TYG2_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC	Domains G3DSA:2.170.270.10 G3DSA:3.30.40.10 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 IPR034732 IPR041955 IPR042011 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50868 PS51566 PS51805 PTHR13793 PTHR13793:SF134 SM00249 SM00317 SM00508 SSF57903 SSF82199 cd15495 cd15663	31
LotjaGi1g1v0226000_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp\|Q8GZ42\|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr\|A0A151TYG2\|A0A151TYG2_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR019786 IPR019787 IPR042011 PF13831 PS01359 PS50016 PTHR13793 PTHR13793:SF132 SM00249 SSF57903 cd15495	15
LotjaGi1g1v0284200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp\|Q8GZ42\|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr\|I1JYS9\|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0284200	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.140 G3DSA:3.30.40.10 IPR000313 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 IPR034732 IPR041955 IPR042011 PF00628 PF00855 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50812 PS50868 PS51566 PS51805 PTHR13793 PTHR13793:SF134 SM00249 SM00317 SM00508 SSF57903 SSF63748 SSF82199 cd15495 cd15517 cd15663	38
LotjaGi3g1v0394900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histone-lysine N-methyltransferase; TAIR: AT3G61740.2 SET domain protein 14; Swiss-Prot: sp\|Q9M364\|ATX3_ARATH Histone-lysine N-methyltransferase ATX3; TrEMBL-Plants: tr\|A0A151SIL1\|A0A151SIL1_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi3g1v0394900	Domains G3DSA:2.170.270.10 G3DSA:2.30.30.140 G3DSA:3.30.40.10 IPR000313 IPR001214 IPR001965 IPR003616 IPR011011 IPR013083 IPR019786 IPR019787 IPR025780 IPR034732 IPR042011 PF00628 PF00855 PF00856 PF13831 PF13832 PS01359 PS50016 PS50280 PS50812 PS50868 PS51566 PS51805 PTHR13793 PTHR13793:SF141 SM00249 SM00293 SM00317 SM00508 SSF57903 SSF63748 SSF82199 cd15495 cd15517 mobidb-lite	38

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50