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IPR026489 is a CXC domain.
<p>Polycomb group (Pc-G) proteins ensure the stable inheritance of expression patterns through cell division and regulate the control of cell proliferation. The Enhancer of zeste (E(z))-type of Pc-G proteins includes:<ul> <li>Drosophila melanogaster Enhancer of zeste E(z).</li> <li>Mammalian ENX-1 and ENX-2.</li> <li>Arabidopsis thaliana CURLY LEAF (CLF), a transcriptional repressor of floral homeotic gene AGAMOUS.</li> <li>Arabidopsis thaliana CLF-like.</li> <li>Arabidopsis thaliana MEDEA (MEA), a suppressor of endosperm development.</li> <li>Arabidopsis thaliana EZA1.</li> </ul>These proteins contain a SET domain at the C terminus. Unique to them is the presence of a CXC domain, an ~65-residue cys-rich region preceding the SET domain. The spacing of 17 cyteines is conserved. The CXC domain contains three units of C-X(6)-C-X(3)-C-X-C motif, although the most C- terminal unit is reverse-oriented. Because of its evolutionary conservation, the CXC domain is likely to be involved in an important function of E(z)- related proteins [[cite:PUB00060503], [cite:PUB00060504], [cite:PUB00060505]]. The CXC domain shows some similarity to the CRC domain found in the tesmin/ TSO1 protein family [[cite:PUB00057402]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356501867|ref|XP_003519745.1| | 19 | ||
– | PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| | 16 | ||
– | PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| | 16 | ||
– | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| | 17 | ||
– | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| | 17 | ||
– | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| | 17 | ||
– | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356534774|ref|XP_003535927.1| | 17 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3; TrEMBL-Plants: tr|B9RNE0|B9RNE0_RICCO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi2g1v0010500 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT2G23380.1 SET domain-containing protein; Swiss-Prot: sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF; TrEMBL-Plants: tr|I1LHC7|I1LHC7_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi2g1v0403200 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.2 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU3|K7LGU3_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 18 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G02020.1 SET domain-containing protein; Swiss-Prot: sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1; TrEMBL-Plants: tr|K7LGU2|K7LGU2_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi5g1v0244300 | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 5.56 |