Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR027522 is a Probable alanine--tRNA ligase, plants.
<p>Alanine-tRNA ligase catalyses the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). It also edits incorrectly charged tRNA(Ala) via its editing domain.</p> <p>This entry consists of probable alanine-tRNA ligases from plants.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| | 28 | ||
| – | PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like [Glycine max] gi|356516209|ref|XP_003526788.1| | 28 | ||
| – | Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 | 32 | ||
| – | Alanine--tRNA ligase; TAIR: AT5G22800.1 Alanyl-tRNA synthetase, class IIc; Swiss-Prot: sp|B9HQZ6|SYAP_POPTR Alanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V7AUH7|V7AUH7_PHAVU Probable alanine--tRNA ligase, chloroplastic; Found in the gene: LotjaGi1g1v0556500 | 32 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00673 | CDD | 1 | 25.00 |