Domain Predictions — View

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IPR033825

Source: InterPro

Description

IPR033825 is a FACT complex subunit Spt16, peptidase M24-like domain.

<p>Spt6 (also known as cdc68) is a component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes [[cite:PUB00081355], [cite:PUB00081353], [cite:PUB00081354]]. Spt16 is a non-peptidase homologue in peptidase family M24 [[cite:PUB00003579]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2776600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: FACT complex subunit SPT16-like [Glycine max] gi\|356539779\|ref\|XP_003538371.1\|	Domains Coil G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08644 PF14826 PTHR13980 SM01285 SM01286 SSF55920 cd01091 mobidb-lite	17
Lj6g3v0388030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08512 PF08644 PF14826 PTHR13980 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	19
Lj6g3v0388030.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08512 PF08644 PF14826 PTHR13980 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	19
Lj6g3v0388060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: FACT complex subunit SPT16-like [Glycine max] gi\|356539779\|ref\|XP_003538371.1\|	Domains G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08644 PF14826 PTHR13980 SM01285 SM01286 SSF55920 cd01091 mobidb-lite	16
Lj6g3v0388070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08644 PF14826 PTHR13980 SM01285 SM01286 SSF55920 cd01091 mobidb-lite	16
Lj6g3v0389080.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: FACT complex subunit SPT16-like [Glycine max] gi\|356569402\|ref\|XP_003552890.1\|	Domains G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 PF00557 PF08512 PF08644 PF14826 PTHR13980 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	19
LotjaGi1g1v0481300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7H1L5\|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0481300	Domains Coil G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	27
LotjaGi1g1v0481300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7H1L5\|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0481300	Domains Coil G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	27
LotjaGi6g1v0051400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7H1L5\|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26
LotjaGi6g1v0051400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7H1L5\|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26
LotjaGi6g1v0051400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7H1L5\|A0A1J7H1L5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051400	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26
LotjaGi6g1v0051500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7IIX4\|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26
LotjaGi6g1v0051500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7IIX4\|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26
LotjaGi6g1v0051500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FACT complex subunit SPT16; TAIR: AT4G10710.1 global transcription factor C; Swiss-Prot: sp\|O82491\|SPT16_ARATH FACT complex subunit SPT16; TrEMBL-Plants: tr\|A0A1J7IIX4\|A0A1J7IIX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051500	Domains G3DSA:2.30.29.150 G3DSA:2.30.29.210 G3DSA:2.30.29.30 G3DSA:3.40.350.10 G3DSA:3.90.230.10 IPR000994 IPR011993 IPR013719 IPR013953 IPR029148 IPR029149 IPR033825 IPR036005 IPR040258 PF00557 PF08512 PF08644 PF14826 PTHR13980 PTHR13980:SF18 SM01285 SM01286 SM01287 SSF55920 cd01091 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.14