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IPR039206 is a MORF/ORRM1/DAG-like.
<p>This entry represents a group of plant proteins, including multiple organellar RNA editing factor 1-9 (MORF1-9) and ORRM1 from Arabidopsis, and DAG protein from Antirrhinum majus. DAG shares protein sequence similarity with MORFs and the N terminus of ORRM1. However, ORRM1 also contains a C-terminal RNA recognition motif (RRM), which is absent in DAG and MORFs. They are involvled in C-to-U RNA editing (deamination of cytidine to uridine), an essential step of RNA maturation in chloroplasts and mitochondria of land plants from bryophytes to angiosperms [[cite:PUB00089298], [cite:PUB00089300]]. They interact selectively with diverse PPR (PLS-class of pentatricopeptide repeat) proteins, and these interactions are important for their RNA editing function. MORFs are required for RNA editing in mitochondria and plastids [[cite:PUB00089297]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cytidine to uridine editing | The conversion of a cytosine residue to uridine in an RNA molecule by deamination. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1LV52|I1LV52_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248400 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0S3SIF6|A0A0S3SIF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0157000 | 4 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G06790.2 plastid developmental protein DAG; Swiss-Prot: sp|Q84JZ6|MORF3_ARATH Multiple organellar RNA editing factor 3, mitochondrial; TrEMBL-Plants: tr|I3T5W5|I3T5W5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0338200 | 10 | ||
| – | DAG, chloroplastic; TAIR: AT1G32580.1 plastid developmental protein DAG; Swiss-Prot: sp|O22793|MORF2_ARATH Multiple organellar RNA editing factor 2, chloroplastic; TrEMBL-Plants: tr|V7BHW8|V7BHW8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0187500 | 5 | ||
| – | DAG protein, chloroplastic; TAIR: AT1G32580.1 plastid developmental protein DAG; Swiss-Prot: sp|O22793|MORF2_ARATH Multiple organellar RNA editing factor 2, chloroplastic; TrEMBL-Plants: tr|B9HKS9|B9HKS9_POPTR Plastid developmental protein DAG; Found in the gene: LotjaGi6g1v0003900 | 10 | ||
| – | DAG protein, chloroplastic; TAIR: AT3G15000.1 cobalt ion binding protein; Swiss-Prot: sp|Q9LKA5|MORF8_ARATH Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A1J7GXT3|A0A1J7GXT3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0254500_LC | 8 | ||
| – | DAG protein, chloroplastic; TAIR: AT1G11430.1 plastid developmental protein DAG; Swiss-Prot: sp|Q9LPZ1|MORF9_ARATH Multiple organellar RNA editing factor 9, chloroplastic; TrEMBL-Plants: tr|I3SC95|I3SC95_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0343700 | 5 | ||
| – | DAG, chloroplastic; TAIR: AT4G20020.1 multiple organellar RNA editing factor; Swiss-Prot: sp|O49429|MORF1_ARATH Multiple organellar RNA editing factor 1, mitochondrial; TrEMBL-Plants: tr|A0A151T853|A0A151T853_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0362300 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.14 |