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IPR040608 is a Snf8/Vps36 family.
<p>This family includes Snf8 and Vps36. Vps36 is involved in Golgi to endosome trafficking. Snf8 is a component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs [[cite:PUB00019520]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | 14 | ||
| – | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | 14 | ||
| – | Vacuolar protein sorting-associated protein 36; TAIR: AT5G04920.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36; TrEMBL-Plants: tr|V7AJ01|V7AJ01_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0303100 | 14 | ||
| – | Vacuolar protein sorting-associated protein; TAIR: AT4G27040.1 EAP30/Vps36 family protein; Swiss-Prot: sp|Q5M759|VP221_ARATH Vacuolar protein sorting-associated protein 22 homolog 1; TrEMBL-Plants: tr|G7IXK4|G7IXK4_MEDTR Vacuolar protein sorting-associated protein; Found in the gene: LotjaGi6g1v0166400 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF46785 | SUPERFAMILY | 1 | 25.00 |