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IPR041532

Source: InterPro

Description

IPR041532 is a RlmI-like, PUA domain.

<p>This entry represents the RNA-binding PUA domain which co-occurs N-terminal to SAM-dependent methyltransferase domains, found in Escherichia coli RlmI (rRNA large subunit methyltransferase gene I, also called YccW) and Thermus thermophilus methyltransferase RlmO ([swissprot:Q5SI81]), which are 5-methylcytosine methyltransferases (m5C MTases) that play a role in modifying 23S rRNA. This entry also includes Pyrococcus horikoshii PH1915 ([swissprot:O59578])that may play a role as a 5-methyluridine MTase, and/or perform similar roles [[cite:PUB00050847], [cite:PUB00102427], [cite:PUB00038174], [cite:PUB00039385], [cite:PUB00003444], [cite:PUB00036063]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
LotjaGi3g1v0298500.1
– Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B4RRY8|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr|A0A151SMM6|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500
Domains
17
LotjaGi3g1v0298500.2
– Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B4RRY8|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr|A0A151SMM6|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500
Domains
24
LotjaGi3g1v0298500.3
– Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B4RRY8|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr|A0A151SMM6|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500
Domains
24
LotjaGi3g1v0298500.4
– Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B4RRY8|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr|A0A151SMM6|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd11572 CDD 1 25.00