Domain Predictions — View

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PF17785

Source: Pfam

Description

PUA-like domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0298500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|B4RRY8\|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr\|A0A151SMM6\|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500	Domains G3DSA:2.30.130.10 G3DSA:3.30.750.80 G3DSA:3.40.50.150 IPR002478 IPR015947 IPR019614 IPR029063 IPR036974 IPR041532 PF10672 PF17785 PTHR42873 SM00359 SSF53335 SSF88697 cd02440 cd11572	17
LotjaGi3g1v0298500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|B4RRY8\|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr\|A0A151SMM6\|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500	Domains G3DSA:2.30.130.10 G3DSA:3.30.750.80 G3DSA:3.40.50.150 IPR002478 IPR015947 IPR019614 IPR029063 IPR036974 IPR041532 NON_CYTOPLASMIC_DOMAIN PF10672 PF17785 PTHR42873 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00359 SSF53335 SSF88697 SignalP-TM SignalP-noTM cd02440 cd11572	24
LotjaGi3g1v0298500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|B4RRY8\|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr\|A0A151SMM6\|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500	Domains G3DSA:2.30.130.10 G3DSA:3.30.750.80 G3DSA:3.40.50.150 IPR002478 IPR015947 IPR019614 IPR029063 IPR036974 IPR041532 NON_CYTOPLASMIC_DOMAIN PF10672 PF17785 PTHR42873 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00359 SSF53335 SSF88697 SignalP-TM SignalP-noTM cd02440 cd11572	24
LotjaGi3g1v0298500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosomal RNA large subunit methyltransferase I; TAIR: AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|B4RRY8\|RLMI_ALTMD Ribosomal RNA large subunit methyltransferase I; TrEMBL-Plants: tr\|A0A151SMM6\|A0A151SMM6_CAJCA Ribosomal RNA large subunit methyltransferase I; Found in the gene: LotjaGi3g1v0298500	Domains G3DSA:2.30.130.10 G3DSA:3.30.750.80 G3DSA:3.40.50.150 IPR002478 IPR015947 IPR019614 IPR029063 IPR036974 IPR041532 PF10672 PF17785 PTHR42873 SM00359 SSF53335 SSF88697 cd02440 cd11572	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd11572	CDD	1	25.00