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PF01789

Source: Pfam

Description

PsbP

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0009523
Cellular component Photosystem II A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
Subterm of
GO:0009654
Cellular component Photosystem II oxygen evolving complex A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).
Subterm of
Part of
GO:0015979
Biological process Photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
Subterm of
GO:0019898
Cellular component Extrinsic component of membrane The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
Subterm of

Associated Lotus transcripts 27

Transcript Name Description Predicted domains Domain count
Lj0g3v0185319.1
– PREDICTED: psbP-like protein 2, chloroplastic-like [Cicer arietinum] gi|502121406|ref|XP_004497306.1|
Domains
8
Lj0g3v0317529.1
– PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max] gi|356536494|ref|XP_003536772.1|
Domains
7
Lj1g3v1931390.1
– PREDICTED: psbP domain-containing protein 5, chloroplastic-like [Glycine max] gi|356515500|ref|XP_003526438.1|
Domains
7
Lj1g3v3053810.1
– PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like [Glycine max] gi|356557150|ref|XP_003546881.1|
Domains
8
Lj1g3v3194570.1
– PREDICTED: psbP-like protein 1, chloroplastic-like [Glycine max] gi|356499671|ref|XP_003518660.1|
Domains
8
Lj1g3v3194570.2
– PREDICTED: psbP-like protein 1, chloroplastic-like isoform X2 [Cicer arietinum] gi|502102481|ref|XP_004492089.1|
Domains
7
Lj1g3v3404330.1
– PREDICTED: psbP domain-containing protein 3, chloroplastic-like [Glycine max] gi|356508481|ref|XP_003522985.1|
Domains
7
Lj1g3v4083160.1
– PsbP domain-containing protein [Medicago truncatula] gi|357509231|ref|XP_003624904.1|
Domains
7
Lj2g3v3071910.1
– PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like [Glycine max] gi|356526942|ref|XP_003532074.1|
Domains
7
Lj6g3v2156520.1
– PREDICTED: psbP domain-containing protein 1, chloroplastic-like [Glycine max] gi|356505763|ref|XP_003521659.1|
Domains
7
Lj6g3v2156530.1
– PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 1, chloroplastic-like [Glycine max] gi|356571066|ref|XP_003553702.1|
Domains
13
LotjaGi1g1v0046600.1
– Oxygen-evolving enhancer protein 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151U238|A0A151U238_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0046600
Domains
7
LotjaGi1g1v0046600.2
– Oxygen-evolving enhancer protein 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic; TrEMBL-Plants: tr|A0A0L9UVJ1|A0A0L9UVJ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0046600
Domains
7
LotjaGi1g1v0272900.1
– Photosystem II reaction center PsbP family protein; TAIR: AT1G77090.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|O49292|PPD4_ARATH PsbP domain-containing protein 4, chloroplastic; TrEMBL-Plants: tr|A0A151TSA0|A0A151TSA0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0272900
Domains
7
LotjaGi1g1v0389800.1
– Photosystem II reaction center PsbP family protein; TAIR: AT5G11450.2 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|P82715|PPD5_ARATH PsbP domain-containing protein 5, chloroplastic; TrEMBL-Plants: tr|I3T9M5|I3T9M5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0389800
Domains
7
LotjaGi1g1v0517700.1
– Lumenal PsbP-like protein; TAIR: AT3G63540.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|P82658|TL19_ARATH Thylakoid lumenal 19 kDa protein, chloroplastic; TrEMBL-Plants: tr|I1KTL9|I1KTL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0517700
Domains
8
LotjaGi1g1v0533900.1
– PsbP-like protein 1; TAIR: AT3G55330.1 PsbP-like protein 1; Swiss-Prot: sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic; TrEMBL-Plants: tr|I3S322|I3S322_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533900
Domains
8
LotjaGi1g1v0533900.2
– PsbP-like protein 1; TAIR: AT3G55330.1 PsbP-like protein 1; Swiss-Prot: sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic; TrEMBL-Plants: tr|I3S322|I3S322_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533900
Domains
7
LotjaGi1g1v0569700.1
– Photosystem II reaction center PsbP family protein; TAIR: AT1G76450.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|Q9S720|PPD3_ARATH PsbP domain-containing protein 3, chloroplastic; TrEMBL-Plants: tr|I3T8K8|I3T8K8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0569700
Domains
7
LotjaGi1g1v0658600.1
– Photosystem II reaction center PsbP family protein; TAIR: AT3G56650.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q9LXX5|PPD6_ARATH PsbP domain-containing protein 6, chloroplastic; TrEMBL-Plants: tr|A0A1J7HRX1|A0A1J7HRX1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0658600
Domains
8
LotjaGi2g1v0222700.1
– PsbP-domain protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700
Domains
8
LotjaGi2g1v0222700.2
– PsbP-like protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700
Domains
14
LotjaGi2g1v0222700.3
– PsbP-domain protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700
Domains
7
LotjaGi5g1v0222100.1
– PsbP family protein, expressed; TAIR: AT3G05410.2 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|F4J7A7|PPD7_ARATH PsbP domain-containing protein 7, chloroplastic; TrEMBL-Plants: tr|A0A151U4S5|A0A151U4S5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0222100
Domains
11
LotjaGi5g1v0222100.2
– Photosystem II reaction center PsbP family protein; TAIR: AT3G05410.2 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|F4J7A7|PPD7_ARATH PsbP domain-containing protein 7, chloroplastic; TrEMBL-Plants: tr|A0A151U4S5|A0A151U4S5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0222100
Domains
11
LotjaGi5g1v0357400.1
– PsbP-like protein 2; TAIR: AT2G39470.1 PsbP-like protein 2; Swiss-Prot: sp|O80634|PNSL1_ARATH Photosynthetic NDH subunit of lumenal location 1, chloroplastic; TrEMBL-Plants: tr|I3SJS5|I3SJS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0357400
Domains
8
LotjaGi6g1v0184900.1
– Oxygen-evolving enhancer 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic; TrEMBL-Plants: tr|I3T637|I3T637_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0184900
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF55724 SUPERFAMILY 1 3.70