Domain Predictions — View

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cd02856

Source: CDD

Description

E_set_GDE_Isoamylase_N

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0304069.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: isoamylase 2, chloroplastic-like [Cicer arietinum] gi\|502109456\|ref\|XP_004493650.1\|	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02922 PTHR10357 PTHR10357:SF115 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11346	21
Lj1g3v1525840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] gi\|356508064\|ref\|XP_003522781.1\|	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02922 PTHR10357 PTHR10357:SF74 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11326	21
Lj4g3v3015110.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] gi\|139867053\|dbj\|BAF52941.1\|	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013781 IPR013783 IPR014756 IPR015902 IPR017853 PF00128 PF02922 PTHR10357 PTHR10357:SF169 SM00642 SSF51445 SSF81296 cd02856 cd11326	18
LotjaGi1g1v0340200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp\|Q9M0S5\|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr\|K7KJ81\|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02922 PTHR43002 PTHR43002:SF3 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11326	19
LotjaGi1g1v0340200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp\|Q9M0S5\|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr\|K7KU93\|K7KU93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR006048 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02806 PF02922 PTHR43002 PTHR43002:SF3 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11326	21
LotjaGi1g1v0340200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan branching enzyme GlgB; TAIR: AT4G09020.1 isoamylase 3; Swiss-Prot: sp\|Q9M0S5\|ISOA3_ARATH Isoamylase 3, chloroplastic; TrEMBL-Plants: tr\|K7KJ81\|K7KJ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0340200	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02922 PTHR43002 PTHR43002:SF3 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11326	19
LotjaGi1g1v0729900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp\|Q8L735\|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr\|K7MYJ2\|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02922 PTHR43002 PTHR43002:SF6 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11346	19
LotjaGi1g1v0729900.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Debranching enzyme 1; TAIR: AT1G03310.1 debranching enzyme 1; Swiss-Prot: sp\|Q8L735\|ISOA2_ARATH Isoamylase 2, chloroplastic; TrEMBL-Plants: tr\|K7MYJ2\|K7MYJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02922 PTHR43002 PTHR43002:SF6 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11346	19
LotjaGi4g1v0440200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1,4-alpha-glucan branching enzyme GlgB; TAIR: AT2G39930.1 isoamylase 1; Swiss-Prot: sp\|O04196\|ISOA1_ARATH Isoamylase 1, chloroplastic; TrEMBL-Plants: tr\|A0A151TKF6\|A0A151TKF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0440200	Domains G3DSA:2.60.40.10 G3DSA:2.60.40.1180 G3DSA:3.20.20.80 IPR004193 IPR006047 IPR013780 IPR013783 IPR014756 IPR017853 PF00128 PF02922 PTHR43002 PTHR43002:SF1 SM00642 SSF51011 SSF51445 SSF81296 cd02856 cd11326	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd11326	CDD	1	11.11