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PF04628

Source: Pfam

Description

Sedlin, N-terminal conserved region

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006888
Biological process ER to Golgi vesicle-mediated transport The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Subterm of

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
Lj1g3v1363170.1
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
Domains
10
Lj1g3v1363170.2
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
Domains
7
Lj1g3v1486180.1
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
Domains
7
Lj1g3v2897290.1
– PREDICTED: trafficking protein particle complex subunit 2-like protein-like [Glycine max] gi|356568553|ref|XP_003552475.1|
Domains
6
LotjaGi1g1v0326200.1
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200
Domains
8
LotjaGi1g1v0326200.2
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200
Domains
8
LotjaGi1g1v0326200.3
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|P0DI81|TPC2A_HUMAN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A151T4B6|A0A151T4B6_CAJCA Trafficking protein particle complex subunit 2; Found in the gene: LotjaGi1g1v0326200
Domains
8
LotjaGi1g1v0335900.1
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900
Domains
8
LotjaGi1g1v0335900.2
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900
Domains
8
LotjaGi1g1v0491600.1
– Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|I1N439|I1N439_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491600
Domains
8
LotjaGi1g1v0491600.2
– Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|G7KTB1|G7KTB1_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0491600
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd14854 CDD 1 9.09