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PF08625

Description

Utp13 specific WD40 associated domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process RRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
Cellular component Small-subunit processome A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
PREDICTED: transducin beta-like protein 3-like [Glycine max] gi|356513431|ref|XP_003525417.1| 20
Transducin/WD40 repeat protein; TAIR: AT5G16750.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3; TrEMBL-Plants: tr|I1K010|I1K010_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0233100 21
Transducin/WD40 repeat protein; TAIR: AT5G16750.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3; TrEMBL-Plants: tr|I1K010|I1K010_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0233100 21
Transducin/WD40 repeat protein; TAIR: AT5G16750.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3; TrEMBL-Plants: tr|I1K010|I1K010_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0233100 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00