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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0233100 |
| Transcript ID | LotjaGi4g1v0233100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT5G16750.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3; TrEMBL-Plants: tr|I1K010|I1K010_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0233100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:54420021..54428704) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGCTCTTCGGTTGAAATCAAACTACCGTTGCGTTCCAGCTCTACAGCAGTTCTACACCGGCGGCCCCTATGTAGT CTCCTCCGACGGCTCCTTCATCGCATGTGCATGTGGCGAATCCATCAAAATCGTTGATTCCGCCAACGCATCCATCAGGT CCACCCTTCAAGGCGACTCGGAGTCCGTCACCGCATTGGCTCTCTCCCCTGACGATAACCTCCTCTTCTCATCCGGCCAC AGCCGCCAAATCCGAGTTTGGGATCTGTCCACCCTCAAATGTGTCCGCTCCTGGAAGGTAGCTCAATTTTATATAATAAT AATTAGGTTTATCAAATTTAGATTCAATTGTGTAAGGTTAATGTTACTGATATTGTATGAATGATGGCACTGGTGTAGGG TCATGAAGGTCCTGTGATGTGTATGTCGTGTCACCCTTCTGGGGGGTTACTGGCTACCGGGGGAGCTGATAGGAAAGTCC TTGTCTGGGATGTGGATGGTGGCTACTGCACTCATTTCTTTAAAGGTCATGGTGGAGTTGTTTCTTGTGTTATGTTCCAT CCGGACCCGGAGAAACAGCTCGTGAGTCTCAAACTTCGTACTTTTAGTTTTTCGCACTATGACAGTGTATATTTTTGTAA TAGTAGTGTTAACTAATTGATGGGTTCATACAGAGCGGATTAAATGACAATCACAGATTGTTGTTATTTTAGCCACGTTT TAAAATCTGACTTTAATTGAAAAAGGGGCAAACTTACCCTCCTAATTTTTCTGATGGTAAAGTCTAAAACGACACGGCAT GTGGTATGGACTATCAAGTTTTTGATATTTTGACCATTCAGTATACTGAGTAGAGTGATGAATGATGGCTGGGAGTGGGG GAATGCAAGTTTGATTAATGGTGATGTAATATGACCTTTTCATTTGGGTATGTTTTCTACCAATTTTATATTACTATTCA TGATTGTTGAAGTACAAGAAGATGGAAGTTAACTGAACATCAGAAGGGGGAAGGGTTTAATTTAATAACCTTCAAATTAC ACAATTGATAGGACTGTTTGTTTCTAATCCTTTTAATGCAAATTTGAAATTTTTTTATTGTTACCCCATTTGTTGTTTTC AGCCATTGCAAAGTGTTGATTAATGATTCCAACTTTCTTCATATGTTTAACTGATTATGATGAGGTTGGTGCCTGCAGCT TTTTTCTGGGAGTGATGATGGTGGTGATCATGCAACTGTAAAGGTTTGGGATATCTCCAAGACCAAGAGAAAGAACTGCA TTGCATCACTAGATAATCATCGTTCAGCAGTGACTTCAATGGCAGTATCTGAAGATGGATGGACATTGCTTAGTGCTGGA AGAGATAAGGCAGGCTCTATAAGGCTCTGTCTTACCTTTTTTTCTTGTTAATTTACCCTTGATACTAGTTCTGCATCATG AGCTTATTCTTTATTCTCTTTTATTTATTTATTCCCTTTTGGATTTTGTGTAAGTTTCTTCACTTTTCTTTGGGACTTAA GCAGCATAATTGAAGTTTTAAAAACTCCTGAATATTAAGTGCTTTTAACATTTATTTATTTATTATTATTATTATTATTA TTATTATTATTTTTAATTTCAAGTGAGACGGACCATACATTACATGCTGCATGATTTATCTGGAAGAGATTTTAATTAGT ATGCCGAAGTTGTAACAAATGAAGTCTACTAAATTGACAAACTAGTGTGAATTTTTATTGGTAGGTTGTAAGTGTGTGGG ATCTTCATGATTATAGCAATAAGAAGACTGTCATCACAAATGAGGCCGTTGAAGCTGTTTGTGTAATTGGTGCTGGGAAT CCTTTTGCTTCATCTCTGGATTCATATCGGAAAAATGCAAAAAAGCATGCTAGTTCCCAAGCTTTATATTTCGTTACAGT TGGTGAACGGGGAATTGTGCGCATATGGTGTTCTGAAAGGTAATATATACGGATTTTTTGTTAGTTGATATTTTGAATTC AATATCATTATGCCCTAGTTAGACTTAGTTAATAATAGTAGAGTAAATGTTTTTAGGCGGGTATGCTAGGAGAGTTTAAA GCTTGGATTTAATTTTGTCATTGGGTATTGATTCTAATGGAGGCAGCTTGTAAATAATCTGACACTCTGAAATATGATGT AAATACTCTATAACAATAAAATATTTGTTGCTGTGCATTCCCTCATTAGTTTTTTTTTGTTAACAGTGCAGTTTGCATAT TTGAGCAAAAGGCTTCAGATGTTACAGCTAGCATAGATGAGGATGGCTCACAAAGGGGTTTTACTTCTGCTGTTATGGTC ACCTCAAAACAAGAATTGCTTTGTGTGACTGCAGATCAGCAGTTTTTGTATTACACTCTTGAATACACTGAAGAATTGTT AAAATTAACTCTAACCAAAAGACTTGTGGGATATAATGAAGAAGTTATAGACATGAAGTTTATTGGGGATGATGAAAAGT TCCTTGCTCTTGCTACAAATCTTGAACAGGTACGAAAATTTGTATTTAATCCAGAAATCTGAAACTGTTGTGATTCAAGT GGAATGTTATTTTTTTTTACAAACCAATTAATTTGAACATATCAATACTGAAAAAGGCTACTGCTGGATATTGTTTTCAT TTAGTTGATTATTTTTGCAGTGTTCGTCCTTGTCACTTCACTCAAATATTGATTTAGTTTGTTCTTGAAATAAACGTACT TACTACCTAGTGCTGAATACAGCATTTTTCATGATCCATTTCTCTTTTTATATGGATTGAAAATAATGCTATGCATTCCC TGAAAATAACTTTTTATTGCTTTCATAGTTTTTTGTGTAAAACACTGAAAATAGGAAACAGTGAAAACAATGTGGTGCTT TTGTAATTAAAATTCTAAACAGAAAATGGAATAAAAAATGAAAATGGAAACCAAACATGAGTTTTTCTAGAATTTTTTAT GGATAAGAATATTTGGTCGGTAGATTCCATTTGTAGATATTTTTCATTTTGTAATTGATTTCCTCAACTTTTGAAATAAG ACCATTTTGGAATTCTTCAATTCACAAAGGCAATGAGGTGTATTCATCTCTAAGATATTCACGATGATAAGATGTTGTCA TGGTCTTATTTATGCTTTTGCTTTGGTGAGTGATGACATGTGAAAAGCTTAATGGTTTTTTAGCTGGTTTTTCATTTGAA AGGCATAGAGTGAGAAGTGCTTTTGGAATTTCCATTTCTAATTATGGTGTTGTCGTCACCATAACTTTTTACAGTATTTC ATAATCTTCTATATAGATAAGGCAATCAACATGTTCTATATTAATTCAAATATTTTCTAATCATACCTTCTTAAATCTTA GTTCTTAGTGAATCTAGTATCATTGAAAAAGGTAAGAATAAGAACAGGAAAAAGGAATAAAATTGGATCCTTAATCACTA ATTTGTTTCAAAGACTTGCATAATACTATACAGGCAAACTATATGTCCTAATTTTTTGTACTAGTTAAAAGAAAAATAAA ATAAAATCACAGTCAATTGTATGGTGCAACGATTTGCATAGTATCACACAAACAAACTAAATGTCCTATTTTTTTTTATC TTGTACTATTACAGTTTGTCAAATTAAATGTGTACAGATATCATCAAAAAATTAAAAGTAAACATTGACACTCCAGTTAT TGGGATTTGGATGATTGATGAGTGTGAAAAGTTCAGCCCTTGATTCACCACCCTTCAATTTGTATGGATTTGCGTCCACC AAGAGTAGTGTTTAAGGTTTAGGTTTTTAATGTAATACTCCATTGAATCTTTGCAGGTTCGGGTTTATGACCTTGCATCT ATGTCATGTTCCTATGTCTTATCTGGACATACTGAAATTGTTCTGTGCCTTGACACCTGTGTTTCAAGTTCTGGGAGAAC ACTGATTGTAACTGGAAGTAAAGACAACAGTGTAAGTTTTTTCCTCTTTGGTGTCATTTAATACTTTGGATTTTCTTCTA TGGGAATTAATGCTTGTGGTGCACCAGTTCAATGTGTTATCTCTATCAAGTTCATAGTATGCTAATAGTGCAATGTATTG AAGTCTTATGTATAGGAATCAGAAATTACATGACAAATGTCGGCTTGCTGTATAGGTTAGGTTGTGGGATTCAGAAAGTA CAAGTTGCGTCGGAGTTGGTATAGGTCACATGGGAGCTGTTGGAGCCATTGCCTTTTCAAAAAGAAAGCGAGACTTCTTT GTTAGTGGTAGCAGGTTTGTATTGACGCATTTGATACTATTTTTATCCTTCATTTTTAATTCCTTTATCTTGGCTGTTCT TATGCACTCTATTAATGCCACAAAACAATTACTATAAAGTATAAACTTAAAAAGAACATAAAAATTGTAACGAGAGATGA GTTAGGCCTAGGGGTTAAATCTATTCTCAAGTGATATAATGTTACAAAGGAGGCAGTGAGTAAGTTATATCACTATCACT GCTATTATATTGATTTTCAAGATAGCATTCAATTTAGCTCCAATTATGATAATTGTTCGAGTAGATATGATAACAGCATT TTTGAGAACCTTTTGCTGTTAAGGTTGATTGTGGTCTGTTTCACTGTTCTGCAACAGTGATAATGTGATTTTACATATTA GTAATGTCATGGTCGAACTTATATGTGGTGTTGTCTAGTTTGGTTAAAGGTAATGGAAGTGGAAATTCCTGCAAATTTCA TTTGGTTACTAGTTTTATTGAATTGACCTCAGCTTGTCTCTGCAATAACATTGATATAATAAACTTTGTGCTGACTTTAA TCTTGAGTATCTTCCCTTTCTATGTTCTTCACTCAACTATGCTAGGTATCTGCATTTATCTCTCAGCAAGATATTCTGCT ACCAAGGGATCATTTACCCCGAACATAGAATTTGACTTCCCTGTTCTTTCTTTTATATGAACTGAATGTTTTAATTTGTT AAAGTGTTTGCTGTTGAATCCTTTGGTCATAAACTTGCTAGCTTTTGGATGATACTATTCAGATTTATTTCTGATCAATC TTTGTCAATGTTGATCAGTGATCATACTCTTAAGGTGTGGAGTATGGATGGTCTCTCAGACAATATGACAGAGCCAACAA ATTTAAAAGCAAAAGCGGTTGTCGCAGCTCATGACAAAGATATCAATTCTATAGCTGTTGCTCCTAATGATAGTTTAGTA TGTAGTGGTTCTCAGGTTGGTATTATGTATGACCTGCTGCTTTCTTGGGCCTTTTAAATCAACTTATCTAATTATTTAAA AGAAATATTTTCATCTTAGTTGTCTATTTCTTACTATGGTTTTGTCCTGAGTGAGACTACTGAGTACTGACACTGGCTTC TCTCTTTCACCGTTTCTTTTTTTTGAATAATTATAGAATTTTCAGTAGTTAACTATTATTTATTTATTATCTGTATCCAA TCAGGATCGCACGGCTTGTGTTTGGAGACTTCCAGATCTTGTATCAGTAGTTGTATTTAAAGGGCACAAAAGAGGAATCT GGTCTGTAGAATTTTCTCCTGTTGATCAATGTGTTGTAACAGCATCTGGTGATAAGACAATAAGAATATGGGCTATATCC GATGGTTCATGTTTGAAGACATTTGAAGGACACACTTCAAGTGTACTAAGAGCGTTGTTTGTTACTCGTGGGACACAAAT CGTGTCATGTGGTAAGAGGCTATTTGTAGCTCATTATTTTTTTCATTTCTAGCAGTTTGATCGATGTGTGATTAACACTC AATATTTCAGGTGCTGATGGTTTAGTCAAGCTGTGGACCGTAAAAACTAATGAATGTGTTGCCACACATGATCAGCATGA AGACAAGGTAACCATTGATCCTTAATTATGCTCCTCATTTTCTTTTGATTTTTTTTAATCTTGAATGTCATAATATTTTT TTATTTCTATATATACATGCCTGGAAAATTGTGGTTCAAATATGCTGCATGCTTAATTTCTTTGAAGTGGAGTTTTGAAT CTTTTATTATCTTTAAGAAGATTATGCTTGGGCCTATTTAGCCCTTGGCCCGAAAATTTAATAAATGCTACCATGCAGTG CTGACTGCTTAACATTCAAATTATGCTTTCCTTGATCACCCATTATTTCTGAACCCTAGAGAGTTTGAATCCTACTCTTT TTTTTGAAATTATTTGTTTTGTTAAAGGATGTAGATAATAATTTGGCAGTGGTGATTTTTGGTTATCGTCTTGCTCCCAA GGATAGCACATATAATATAGATGATCATCACTTGTTTGAGTGATTTTGATTAACTGTCAAGATTGTTCAAGACTTCAGCT GGTTTGAATCTTAAGAATTAGTTAGTTTGCTTAAGTTATCAGATAGATTCTGGAATGTTGTATACCAAGATGTCATGTTT TATTGACTTTTTCCAAAATTGCTATTGAACTATTTGTTTTCAATTCCATTAATAAATTTTCCCAGACACGTGGTAGAGTT CATGTTTCTTTGCCCTTTTCTTTTGCTAACAAAATTTGGCCTACAGGTTTGGGCCTTGGCTGTAGGCAGGAAAACAGAAA TGCTCGCTACTGGTGGCAGTGATGCTGTTGTCAACTTATGGTTTGATTCTACTGCAGAAGACAAAGAAGAAGCTTTCCGT AAAGAGGTCAGTTAAGCTGATCATATGTTTTTGGTGCCCACATATCCCTGAGGTTAAATCAAAGGCCATGTTTCATGGTT GTCCATGATATAATGATGACTACGATTCAGGCTACAATTGTTCCATCCATGTTACATATTGCTATTTTATTTGTTGGACC AAGATCTCTCACATCTTGGAATTCAAGTGTATGAAACATGTCTGTTAACATTATAAGAAGTTGATTAATTGTCAAAAATT TGAGCATTATATTCATTTTTTTTCAAGAATCTCAACCTTGTTGCAAATATGGAAATAAGGATATCTGTAAATAGAAAATC TACCACAATTTTTATTGTCCATAAGAATCTCAATTCTCAACCTTGTTCCAAACTCCAGATATATTATCCATTGCATATAT GTAATTTTTAGGATACTTTGTAAAAGAAATAACTCTCCCAATTCACTTGTGCGTATTCTGATTCCTCATGTTGATGCAGG AAGAGGAAGTTTTGAAAGGTCAAGAGCTCGAAAATGCTGTCTCAGATGCTAACTATACTCAAGCAATCCAACTTGCATTT AAATTGCGCAGACCCCATAGGCTTTATGAGTTATTTGCAGGACTTTGCAGGTTAGCATTTTTCTATTTTTGTTGTTTGAA TCTTGTTGGCATTCCCTTGACTGATTTTTCTGCAGGAAGGGAGGGGCTGAAAATCAAATTGACCAAGCACTCAAGGCATT GGACAGTGAAGAGCTCCGGACCTTATTTAGCTATGTTCGAGAGTGGAATACAAAACCAAAGCTTTGTTATGTTGCACAGT TTGTGCTTTTCAGAGTTTTCAATATCTTCCCTCCAACAGATATTGTTCAGGTCCCATTTTTTTAACACTTCTTTAAGCTT TGTGAAACTGATCATGCATTTCTTGCATATTGGGATGAATAATGACTGCAATACTTGGGCTGATTACTGAATATAGTTTT AGATTCCCATGTTTGCTGATTTTACTGAGAGCTGCATATGCTGTGTTTGATATGGATTGTGTTTATTGCTGGTCAGATTG TATCTATAAGAAATAAATATGATAGTTGCCACAGTAACAGATAATATTTTTTGGCTGTTGATGCACGATTTGATATAAAC TGACTGCATCTTGGCAGTAGGGTGAAAGCATGTTTTTATATAATATGATTAACTGATGTAAATTGAATTTTATATAGGAT ATACTTATTCAATTGTTGATTTTGGAAAATAAATATTTAAATTAAAAGTATTATTCATTAGTTTAACAGTTTTACACCAG CATCAAGGGATTTTTGCCTCTGTATCATCATCATATTATTTATTTTGCAAGGACTTTGGCTTGTGTTAATTACATTTCTT ACGATGTTTCTGTCATATAGTACGTCATTTACAAGTTTTGGAGGGGGGAAAATTCATGTTTGACGGGCATTTTTTATGCA AAATTTCAGATTAAAGGAATTGGTGAACTTCTTGAAGGTCTTATCCCCTATAGTCAGAGACACTTCGCCAGGATAGACAG ACTTGTTAGAAGCACATTTTTGTTAGACTACGTTCTATCAGGAATGTCAGTCATTGAACCACAAACTCAACAGTTAGAAT CAAAGGCATTGCTGTCTGAAATTGATATTCCAGACAAAGAAAATGGCGTCATCGAGGAGAAAGATCACACTAACGAAAAC ACCACTGCAAAGAAAAGGAAATCACACAAATCAAAACACGGTTCCCATAAGAAAGCCAAGGATGTAGCTTACAATAAAGT TGAATCTATACCATTGTAAGCATAGGATAGGTGTTTTCATCCTCTCAGTATACATATGTTTATTGATAGATGGAAGAGCT GTTCTGGTTCTTTCCAATTTTGGAATCTCGATGTCATTTTAGGCCCAAATTATACTTTCAATTGAATATAAGGTGAGCAG CTGTAATTCTTTCAGTATGTTATTCTTTCATGTGATCCAGAAATGTTTATTGAGCCTTGGAATGAAAGAAAATTAGTGAT TAAGAGACTGCAGAGAAGTGCTGTGCTGTCAACGTTATGTATGA
CDS sequence (LotjaGi4g1v0233100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCTCTTCGGTTGAAATCAAACTACCGTTGCGTTCCAGCTCTACAGCAGTTCTACACCGGCGGCCCCTATGTAGT CTCCTCCGACGGCTCCTTCATCGCATGTGCATGTGGCGAATCCATCAAAATCGTTGATTCCGCCAACGCATCCATCAGGT CCACCCTTCAAGGCGACTCGGAGTCCGTCACCGCATTGGCTCTCTCCCCTGACGATAACCTCCTCTTCTCATCCGGCCAC AGCCGCCAAATCCGAGTTTGGGATCTGTCCACCCTCAAATGTGTCCGCTCCTGGAAGGGTCATGAAGGTCCTGTGATGTG TATGTCGTGTCACCCTTCTGGGGGGTTACTGGCTACCGGGGGAGCTGATAGGAAAGTCCTTGTCTGGGATGTGGATGGTG GCTACTGCACTCATTTCTTTAAAGGTCATGGTGGAGTTGTTTCTTGTGTTATGTTCCATCCGGACCCGGAGAAACAGCTC CTTTTTTCTGGGAGTGATGATGGTGGTGATCATGCAACTGTAAAGGTTTGGGATATCTCCAAGACCAAGAGAAAGAACTG CATTGCATCACTAGATAATCATCGTTCAGCAGTGACTTCAATGGCAGTATCTGAAGATGGATGGACATTGCTTAGTGCTG GAAGAGATAAGGTTGTAAGTGTGTGGGATCTTCATGATTATAGCAATAAGAAGACTGTCATCACAAATGAGGCCGTTGAA GCTGTTTGTGTAATTGGTGCTGGGAATCCTTTTGCTTCATCTCTGGATTCATATCGGAAAAATGCAAAAAAGCATGCTAG TTCCCAAGCTTTATATTTCGTTACAGTTGGTGAACGGGGAATTGTGCGCATATGGTGTTCTGAAAGTGCAGTTTGCATAT TTGAGCAAAAGGCTTCAGATGTTACAGCTAGCATAGATGAGGATGGCTCACAAAGGGGTTTTACTTCTGCTGTTATGGTC ACCTCAAAACAAGAATTGCTTTGTGTGACTGCAGATCAGCAGTTTTTGTATTACACTCTTGAATACACTGAAGAATTGTT AAAATTAACTCTAACCAAAAGACTTGTGGGATATAATGAAGAAGTTATAGACATGAAGTTTATTGGGGATGATGAAAAGT TCCTTGCTCTTGCTACAAATCTTGAACAGGTTCGGGTTTATGACCTTGCATCTATGTCATGTTCCTATGTCTTATCTGGA CATACTGAAATTGTTCTGTGCCTTGACACCTGTGTTTCAAGTTCTGGGAGAACACTGATTGTAACTGGAAGTAAAGACAA CAGTGTTAGGTTGTGGGATTCAGAAAGTACAAGTTGCGTCGGAGTTGGTATAGGTCACATGGGAGCTGTTGGAGCCATTG CCTTTTCAAAAAGAAAGCGAGACTTCTTTGTTAGTGGTAGCAGTGATCATACTCTTAAGGTGTGGAGTATGGATGGTCTC TCAGACAATATGACAGAGCCAACAAATTTAAAAGCAAAAGCGGTTGTCGCAGCTCATGACAAAGATATCAATTCTATAGC TGTTGCTCCTAATGATAGTTTAGTATGTAGTGGTTCTCAGGATCGCACGGCTTGTGTTTGGAGACTTCCAGATCTTGTAT CAGTAGTTGTATTTAAAGGGCACAAAAGAGGAATCTGGTCTGTAGAATTTTCTCCTGTTGATCAATGTGTTGTAACAGCA TCTGGTGATAAGACAATAAGAATATGGGCTATATCCGATGGTTCATGTTTGAAGACATTTGAAGGACACACTTCAAGTGT ACTAAGAGCGTTGTTTGTTACTCGTGGGACACAAATCGTGTCATGTGGTGCTGATGGTTTAGTCAAGCTGTGGACCGTAA AAACTAATGAATGTGTTGCCACACATGATCAGCATGAAGACAAGGTTTGGGCCTTGGCTGTAGGCAGGAAAACAGAAATG CTCGCTACTGGTGGCAGTGATGCTGTTGTCAACTTATGGTTTGATTCTACTGCAGAAGACAAAGAAGAAGCTTTCCGTAA AGAGGAAGAGGAAGTTTTGAAAGGTCAAGAGCTCGAAAATGCTGTCTCAGATGCTAACTATACTCAAGCAATCCAACTTG CATTTAAATTGCGCAGACCCCATAGGCTTTATGAGTTATTTGCAGGACTTTGCAGGAAGGGAGGGGCTGAAAATCAAATT GACCAAGCACTCAAGGCATTGGACAGTGAAGAGCTCCGGACCTTATTTAGCTATGTTCGAGAGTGGAATACAAAACCAAA GCTTTGTTATGTTGCACAGTTTGTGCTTTTCAGAGTTTTCAATATCTTCCCTCCAACAGATATTGTTCAGATTAAAGGAA TTGGTGAACTTCTTGAAGGTCTTATCCCCTATAGTCAGAGACACTTCGCCAGGATAGACAGACTTGTTAGAAGCACATTT TTGTTAGACTACGTTCTATCAGGAATGTCAGTCATTGAACCACAAACTCAACAGTTAGAATCAAAGGCATTGCTGTCTGA AATTGATATTCCAGACAAAGAAAATGGCGTCATCGAGGAGAAAGATCACACTAACGAAAACACCACTGCAAAGAAAAGGA AATCACACAAATCAAAACACGGTTCCCATAAGAAAGCCAAGGATGTAGCTTACAATAAAGTTGAATCTATACCATTAAAT GTTTATTGA
Protein sequence (LotjaGi4g1v0233100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEALRLKSNYRCVPALQQFYTGGPYVVSSDGSFIACACGESIKIVDSANASIRSTLQGDSESVTALALSPDDNLLFSSGH SRQIRVWDLSTLKCVRSWKGHEGPVMCMSCHPSGGLLATGGADRKVLVWDVDGGYCTHFFKGHGGVVSCVMFHPDPEKQL LFSGSDDGGDHATVKVWDISKTKRKNCIASLDNHRSAVTSMAVSEDGWTLLSAGRDKVVSVWDLHDYSNKKTVITNEAVE AVCVIGAGNPFASSLDSYRKNAKKHASSQALYFVTVGERGIVRIWCSESAVCIFEQKASDVTASIDEDGSQRGFTSAVMV TSKQELLCVTADQQFLYYTLEYTEELLKLTLTKRLVGYNEEVIDMKFIGDDEKFLALATNLEQVRVYDLASMSCSYVLSG HTEIVLCLDTCVSSSGRTLIVTGSKDNSVRLWDSESTSCVGVGIGHMGAVGAIAFSKRKRDFFVSGSSDHTLKVWSMDGL SDNMTEPTNLKAKAVVAAHDKDINSIAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKGHKRGIWSVEFSPVDQCVVTA SGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIVSCGADGLVKLWTVKTNECVATHDQHEDKVWALAVGRKTEM LATGGSDAVVNLWFDSTAEDKEEAFRKEEEEVLKGQELENAVSDANYTQAIQLAFKLRRPHRLYELFAGLCRKGGAENQI DQALKALDSEELRTLFSYVREWNTKPKLCYVAQFVLFRVFNIFPPTDIVQIKGIGELLEGLIPYSQRHFARIDRLVRSTF LLDYVLSGMSVIEPQTQQLESKALLSEIDIPDKENGVIEEKDHTNENTTAKKRKSHKSKHGSHKKAKDVAYNKVESIPLN VY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 812 | 809 | 0.0 | – | |
| PANTHER | 4 | 812 | 809 | 0.0 | – | |
| Gene3D | 25 | 136 | 112 | 2.4E-30 | ||
| SUPERFAMILY | 26 | 409 | 384 | 8.79E-59 | ||
| CDD | 28 | 256 | 229 | 3.46398E-49 | – | |
| SMART | 49 | 88 | 40 | 2.2E-7 | ||
| Pfam | 55 | 88 | 34 | 6.5E-4 | ||
| ProSiteProfiles | 56 | 663 | 608 | 79.594 | ||
| ProSiteProfiles | 56 | 97 | 42 | 14.686 | ||
| SMART | 91 | 130 | 40 | 4.4E-12 | ||
| Pfam | 93 | 130 | 38 | 1.1E-7 | ||
| ProSiteProfiles | 98 | 139 | 42 | 13.55 | ||
| ProSitePatterns | 117 | 131 | 15 | - | ||
| SMART | 133 | 178 | 46 | 1.2E-5 | ||
| Pfam | 135 | 178 | 44 | 0.0027 | ||
| Gene3D | 137 | 324 | 188 | 2.9E-24 | ||
| SMART | 184 | 223 | 40 | 1.4E-8 | ||
| Pfam | 186 | 223 | 38 | 0.014 | ||
| ProSiteProfiles | 191 | 232 | 42 | 14.385 | ||
| ProSitePatterns | 210 | 224 | 15 | - | ||
| PRINTS | 210 | 224 | 15 | 6.1E-7 | ||
| SMART | 229 | 286 | 58 | 220.0 | ||
| Gene3D | 345 | 533 | 189 | 4.0E-38 | ||
| SUPERFAMILY | 346 | 653 | 308 | 3.75E-70 | ||
| SMART | 348 | 388 | 41 | 25.0 | ||
| CDD | 357 | 653 | 297 | 1.7679E-58 | – | |
| SMART | 391 | 433 | 43 | 2.6E-6 | ||
| Pfam | 393 | 433 | 41 | 3.7E-6 | ||
| ProSiteProfiles | 398 | 442 | 45 | 11.511 | ||
| PRINTS | 420 | 434 | 15 | 6.1E-7 | ||
| ProSitePatterns | 420 | 434 | 15 | - | ||
| SMART | 436 | 476 | 41 | 1.2E-5 | ||
| Pfam | 438 | 476 | 39 | 0.01 | ||
| ProSiteProfiles | 443 | 485 | 43 | 11.143 | ||
| PRINTS | 463 | 477 | 15 | 6.1E-7 | ||
| SMART | 489 | 528 | 40 | 4.0E-6 | ||
| ProSiteProfiles | 496 | 529 | 34 | 11.645 | ||
| Pfam | 497 | 527 | 31 | 5.0E-4 | ||
| SMART | 531 | 570 | 40 | 4.0E-8 | ||
| Gene3D | 534 | 699 | 166 | 2.0E-39 | ||
| Pfam | 537 | 569 | 33 | 2.3E-5 | ||
| ProSiteProfiles | 538 | 579 | 42 | 15.12 | ||
| SMART | 573 | 612 | 40 | 3.2E-7 | ||
| Pfam | 574 | 611 | 38 | 2.6E-4 | ||
| ProSiteProfiles | 580 | 621 | 42 | 13.015 | ||
| SMART | 615 | 654 | 40 | 5.2E-4 | ||
| ProSiteProfiles | 622 | 653 | 32 | 10.107 | ||
| Pfam | 676 | 809 | 134 | 1.0E-42 | ||
| Coils | 713 | 733 | 21 | - | – | |
| MobiDBLite | 835 | 851 | 17 | - | – | |
| MobiDBLite | 835 | 870 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | RRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. | ||
| Cellular component | Small-subunit processome | A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins. |
Expression pattern of LotjaGi4g1v0233100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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