Domain Predictions — View

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PF10269

Source: Pfam

Description

Transmembrane Fragile-X-F protein

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v1787060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane Fragile-X-F-associated protein isoform 1 [Theobroma cacao] gi\|508773674\|gb\|EOY20930.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR10044 SM00184 SSF57850 TMhelix TRANSMEMBRANE cd00162	15
Lj5g3v1777190.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Baculoviral IAP repeat-containing protein [Medicago truncatula] gi\|357443107\|ref\|XP_003591831.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR10044 PTHR10044:SF122 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57850 TMhelix TRANSMEMBRANE cd00162	19
LotjaGi4g1v0263900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane fragile-X-F-associated protein; TAIR: AT1G18470.1 Transmembrane Fragile-X-F-associated protein; Swiss-Prot: sp\|Q8W5R5\|KN7D_ARATH Kinesin-like protein KIN-7D, mitochondrial; TrEMBL-Plants: tr\|A0A151SLB9\|A0A151SLB9_CAJCA RING finger protein B; Found in the gene: LotjaGi4g1v0263900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR46859 PTHR46859:SF3 SM00184 SSF57850 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0263900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane fragile-X-F-associated protein; TAIR: AT1G18470.1 Transmembrane Fragile-X-F-associated protein; Swiss-Prot: sp\|Q8W5R5\|KN7D_ARATH Kinesin-like protein KIN-7D, mitochondrial; TrEMBL-Plants: tr\|A0A151SLB9\|A0A151SLB9_CAJCA RING finger protein B; Found in the gene: LotjaGi4g1v0263900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR46859 PTHR46859:SF3 SM00184 SSF57850 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0263900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane fragile-X-F-associated protein; TAIR: AT1G18470.1 Transmembrane Fragile-X-F-associated protein; Swiss-Prot: sp\|Q8W5R5\|KN7D_ARATH Kinesin-like protein KIN-7D, mitochondrial; TrEMBL-Plants: tr\|A0A151SLB9\|A0A151SLB9_CAJCA RING finger protein B; Found in the gene: LotjaGi4g1v0263900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR46859 PTHR46859:SF3 SM00184 SSF57850 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0263900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane fragile-X-F-associated protein; TAIR: AT1G73950.1 Transmembrane Fragile-X-F-associated protein; Swiss-Prot: sp\|Q8W5R5\|KN7D_ARATH Kinesin-like protein KIN-7D, mitochondrial; TrEMBL-Plants: tr\|A0A151SLB9\|A0A151SLB9_CAJCA RING finger protein B; Found in the gene: LotjaGi4g1v0263900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR46859 PTHR46859:SF3 SM00184 SSF57850 TMhelix TRANSMEMBRANE	15
LotjaGi5g1v0268100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane fragile-X-F-associated protein; TAIR: AT1G68820.1 Transmembrane Fragile-X-F-associated protein; Swiss-Prot: sp\|Q7M3S9\|RNGB_DICDI RING finger protein B; TrEMBL-Plants: tr\|I1LCS2\|I1LCS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0268100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR001841 IPR013083 IPR019396 NON_CYTOPLASMIC_DOMAIN PF10269 PF13920 PS50089 PTHR46859 PTHR46859:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57850 TMhelix TRANSMEMBRANE	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	14.29