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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1777190 |
| Transcript ID | Lj5g3v1777190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Baculoviral IAP repeat-containing protein [Medicago truncatula] gi|357443107|ref|XP_003591831.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 467 | 467 | 0 | – | |
| PANTHER | 1 | 467 | 467 | 0 | – | |
| Phobius | 1 | 34 | 34 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 19 | 29 | 11 | – | – | |
| Phobius | 30 | 34 | 5 | – | – | |
| Pfam | 35 | 295 | 261 | 5.60E-87 | ||
| Phobius | 35 | 43 | 9 | – | – | |
| Phobius | 44 | 62 | 19 | – | – | |
| TMHMM | 45 | 64 | 20 | – | – | |
| Phobius | 63 | 82 | 20 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 83 | 101 | 19 | – | – | |
| Phobius | 102 | 106 | 5 | – | – | |
| TMHMM | 104 | 124 | 21 | – | – | |
| Phobius | 107 | 124 | 18 | – | – | |
| Phobius | 125 | 152 | 28 | – | – | |
| Phobius | 153 | 173 | 21 | – | – | |
| TMHMM | 153 | 170 | 18 | – | – | |
| Phobius | 174 | 178 | 5 | – | – | |
| Phobius | 179 | 200 | 22 | – | – | |
| TMHMM | 180 | 199 | 20 | – | – | |
| Phobius | 201 | 252 | 52 | – | – | |
| Phobius | 253 | 273 | 21 | – | – | |
| TMHMM | 253 | 271 | 19 | – | – | |
| Phobius | 274 | 284 | 11 | – | – | |
| Phobius | 285 | 305 | 21 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 306 | 467 | 162 | – | – | |
| Gene3D | 405 | 462 | 58 | 3.80E-10 | ||
| SUPERFAMILY | 410 | 463 | 54 | 6.10E-09 | – | |
| Pfam | 419 | 460 | 42 | 9.90E-11 | – | |
| ProSiteProfiles | 420 | 455 | 36 | 11.235 | ||
| CDD | 420 | 458 | 39 | 1.95E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v1777190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1777190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.