Domain Predictions — View

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PF16158

Source: Pfam

Description

Ig-like domain from next to BRCA1 gene

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v1427520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	JOKA2 [Nicotiana tabacum] gi\|337732515\|gb\|AEI71779.1\|	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.240 IPR000270 IPR000433 IPR009060 IPR015940 IPR032350 PF00564 PF00569 PF16158 PS50030 PS50135 PS51745 PTHR20930 PTHR20930:SF0 SM00291 SM00666 SSF46934 SSF54277 SSF57850 cd06398 cd14319 cd14947 mobidb-lite	24
LotjaGi4g1v0228400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-associated protein; TAIR: AT4G24690.1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; Swiss-Prot: sp\|Q9SB64\|NBR1_ARATH Protein NBR1 homolog; TrEMBL-Plants: tr\|A0A0S3R6E3\|A0A0S3R6E3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0228400	Domains G3DSA:1.10.8.10 G3DSA:2.60.40.10 G3DSA:3.10.20.90 G3DSA:3.30.60.90 IPR000270 IPR000433 IPR009060 IPR013783 IPR015940 IPR032350 IPR043145 PF00564 PF00569 PF16158 PS50030 PS50135 PS51745 PTHR20930 PTHR20930:SF6 SM00291 SM00666 SSF46934 SSF54277 SSF57850 cd06398 cd14319 cd14947 mobidb-lite	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00