Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd06398

Source: CDD

Description

PB1_Joka2

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v1427520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	JOKA2 [Nicotiana tabacum] gi\|337732515\|gb\|AEI71779.1\|	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.240 IPR000270 IPR000433 IPR009060 IPR015940 IPR032350 PF00564 PF00569 PF16158 PS50030 PS50135 PS51745 PTHR20930 PTHR20930:SF0 SM00291 SM00666 SSF46934 SSF54277 SSF57850 cd06398 cd14319 cd14947 mobidb-lite	24
LotjaGi4g1v0228400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-associated protein; TAIR: AT4G24690.1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; Swiss-Prot: sp\|Q9SB64\|NBR1_ARATH Protein NBR1 homolog; TrEMBL-Plants: tr\|A0A0S3R6E3\|A0A0S3R6E3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0228400	Domains G3DSA:1.10.8.10 G3DSA:2.60.40.10 G3DSA:3.10.20.90 G3DSA:3.30.60.90 IPR000270 IPR000433 IPR009060 IPR013783 IPR015940 IPR032350 IPR043145 PF00564 PF00569 PF16158 PS50030 PS50135 PS51745 PTHR20930 PTHR20930:SF6 SM00291 SM00666 SSF46934 SSF54277 SSF57850 cd06398 cd14319 cd14947 mobidb-lite	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00