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Zinc finger, ZZ type
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: transcriptional adapter ADA2b-like [Glycine max] gi|356557975|ref|XP_003547285.1| | 23 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1| | 28 | ||
| – | PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cicer arietinum] gi|502146760|ref|XP_004506595.1| | 7 | ||
| – | PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max] gi|356566399|ref|XP_003551419.1| | 16 | ||
| – | PREDICTED: SWI/SNF complex subunit SWI3D-like [Cicer arietinum] gi|502149174|ref|XP_004507421.1| | 26 | ||
| – | JOKA2 [Nicotiana tabacum] gi|337732515|gb|AEI71779.1| | 24 | ||
| – | PREDICTED: transcriptional adapter ADA2-like [Glycine max] gi|356551285|ref|XP_003544007.1| | 23 | ||
| – | PREDICTED: transcriptional adapter ADA2b-like [Glycine max] gi|356557975|ref|XP_003547285.1| | 23 | ||
| – | Auxin transport protein BIG; TAIR: AT3G02260.2 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 | 23 | ||
| – | Auxin transport protein BIG; TAIR: AT3G02260.4 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 | 21 | ||
| – | E3 ubiquitin-protein ligase; TAIR: AT3G24800.1 proteolysis 1; Swiss-Prot: sp|Q8LBL5|PRT1_ARATH E3 ubiquitin-protein ligase PRT1; TrEMBL-Plants: tr|I1KZ98|I1KZ98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0586200 | 18 | ||
| – | E3 ubiquitin-protein ligase; TAIR: AT3G24800.1 proteolysis 1; Swiss-Prot: sp|Q8LBL5|PRT1_ARATH E3 ubiquitin-protein ligase PRT1; TrEMBL-Plants: tr|A0A151SEQ5|A0A151SEQ5_CAJCA E3 ubiquitin-protein ligase PRT1; Found in the gene: LotjaGi3g1v0081200 | 21 | ||
| – | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
| – | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
| – | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
| – | Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
| – | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
| – | SWI/SNF complex subunit SWI3D; TAIR: AT4G34430.3 DNA-binding family protein; Swiss-Prot: sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D; TrEMBL-Plants: tr|G7JG42|G7JG42_MEDTR SWI/SNF complex subunit SWI3D; Found in the gene: LotjaGi3g1v0507400 | 29 | ||
| – | Ubiquitin-associated protein; TAIR: AT4G24690.1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; Swiss-Prot: sp|Q9SB64|NBR1_ARATH Protein NBR1 homolog; TrEMBL-Plants: tr|A0A0S3R6E3|A0A0S3R6E3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0228400 | 28 | ||
| – | Transcriptional adapter ADA2; TAIR: AT3G07740.1 ADA2 2A; Swiss-Prot: sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a; TrEMBL-Plants: tr|A0A0R0GGU1|A0A0R0GGU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024000 | 28 | ||
| – | Transcriptional adapter ADA2; TAIR: AT3G07740.1 ADA2 2A; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|A0A0R0GGU1|A0A0R0GGU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024000 | 28 | ||
| – | Transcriptional adapter ADA2; TAIR: AT4G16420.3 ADA2 2B; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|I1MFQ5|I1MFQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284200 | 28 | ||
| – | Transcriptional adapter ADA2; TAIR: AT4G16420.3 ADA2 2B; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|I1MFQ5|I1MFQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284200 | 28 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.35 |