Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PS00642

Source: ProSitePatterns

Description

Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008137 View details of GO:0008137 AmiGO InterPro QuickGO	Molecular function	NADH dehydrogenase (ubiquinone) activity	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.	Subterm of GO:0050136
GO:0016020 View details of GO:0016020 AmiGO InterPro QuickGO	Cellular component	Membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.	Subterm of GO:0005575
GO:0042773 View details of GO:0042773 AmiGO InterPro QuickGO	Biological process	ATP synthesis coupled electron transport	The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP.	Subterm of GO:0022904 Part of GO:0006119
GO:0055114 View details of GO:0055114 AmiGO InterPro QuickGO	Biological process	Oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.	Subterm of GO:0008152

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v0409410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: NADH dehydrogenase [ubiquinone] gi\|356539814\|ref\|XP_003538388.1\|	Domains G3DSA:3.10.20.30 G3DSA:3.40.50.740 IPR000283 IPR001041 IPR006656 IPR006963 IPR010228 IPR012675 IPR015405 IPR019574 PF00384 PF09326 PF10588 PF13510 PS00641 PS00642 PS00643 PS51085 PS51669 PTHR11615 PTHR11615:SF115 SM00929 SSF53706 SSF54292 SSF54862 TIGR01973 cd00207 cd02773 mobidb-lite	29
LotjaGi6g1v0054900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	NADH-ubiquinone oxidoreductase subunit; TAIR: AT5G37510.1 NADH-ubiquinone dehydrogenase; Swiss-Prot: sp\|Q43644\|NDUS1_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RZR3\|A0A0S3RZR3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0054900	Domains G3DSA:3.10.20.740 G3DSA:3.30.70.20 G3DSA:3.40.50.740 IPR000283 IPR001041 IPR006656 IPR006963 IPR010228 IPR015405 IPR019574 IPR036010 PF00384 PF09326 PF10588 PF13510 PS00641 PS00642 PS00643 PS51085 PS51669 PS51839 PTHR11615 PTHR11615:SF280 SM00929 SSF53706 SSF54292 SSF54862 TIGR01973 cd00207 cd02773 mobidb-lite	31

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00