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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 5'-flap endonuclease activity | Catalysis of the cleavage of a 5' flap structure in DNA, but not other DNA structures; processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis. | ||
| Molecular function | Single-stranded DNA-dependent ATP-dependent DNA helicase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix. | ||
| Biological process | DNA replication, Okazaki fragment processing | The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | DNA replication helicase dna2, putative; TAIR: AT1G08840.4 DNA replication helicase; Swiss-Prot: sp|Q8QHA5|DNA2_XENLA DNA replication ATP-dependent helicase/nuclease DNA2; TrEMBL-Plants: tr|A0A072TZB7|A0A072TZB7_MEDTR DNA replication ATP-dependent helicase Dna2; Found in the gene: LotjaGi1g1v0604000 | 18 | ||
| – | DNA replication helicase dna2, putative; TAIR: AT1G08840.2 DNA replication helicase; Swiss-Prot: sp|Q8QHA5|DNA2_XENLA DNA replication ATP-dependent helicase/nuclease DNA2; TrEMBL-Plants: tr|K7KYE7|K7KYE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604000 | 12 | ||
| – | DNA replication helicase dna2, putative; TAIR: AT1G08840.3 DNA replication helicase; Swiss-Prot: sp|Q8QHA5|DNA2_XENLA DNA replication ATP-dependent helicase/nuclease DNA2; TrEMBL-Plants: tr|K7KYE7|K7KYE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604000 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd18808 | CDD | 1 | 33.33 |