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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Cellular component | Catalytic step 2 spliceosome | A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Transducin/WD-like repeat-protein; TAIR: AT1G10580.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17; TrEMBL-Plants: tr|A0A072V0M7|A0A072V0M7_MEDTR Pre-mRNA splicing factor; Found in the gene: LotjaGi5g1v0161000 | 18 | ||
| – | Transducin/WD-like repeat-protein; TAIR: AT1G10580.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17; TrEMBL-Plants: tr|A0A072V0M7|A0A072V0M7_MEDTR Pre-mRNA splicing factor; Found in the gene: LotjaGi5g1v0161000 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 50.00 |