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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Methyl binding domain protein [Populus trichocarpa] gi|224134745|ref|XP_002321896.1| | 10 | ||
| – | PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Glycine max] gi|356520885|ref|XP_003529090.1| | 13 | ||
| – | PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Glycine max] gi|356520885|ref|XP_003529090.1| | 13 | ||
| – | PREDICTED: methyl-CpG-binding domain-containing protein 4-like [Cicer arietinum] gi|502118026|ref|XP_004496064.1| | 12 | ||
| – | Methyl-CpG-binding domain protein; TAIR: AT5G52230.1 methyl-CPG-binding domain protein 13; Swiss-Prot: sp|Q9LTJ8|MBD13_ARATH Methyl-CpG-binding domain-containing protein 13; TrEMBL-Plants: tr|K7MIH7|K7MIH7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0145200 | 11 | ||
| – | Methyl-CpG-binding domain protein; TAIR: AT5G35330.1 methyl-CPG-binding domain protein 02; Swiss-Prot: sp|Q8LA53|MBD2_ARATH Methyl-CpG-binding domain-containing protein 2; TrEMBL-Plants: tr|A0A151T2U3|A0A151T2U3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0234500 | 15 | ||
| – | Methyl-CpG-binding domain protein; TAIR: AT3G63030.1 methyl-CPG-binding domain 4; Swiss-Prot: sp|Q9LYB9|MBD4_ARATH Methyl-CpG-binding domain-containing protein 4; TrEMBL-Plants: tr|I3SHA3|I3SHA3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0259700 | 13 | ||
| – | Methyl-CpG-binding domain protein; TAIR: AT3G63030.1 methyl-CPG-binding domain 4; Swiss-Prot: sp|Q9LYB9|MBD4_ARATH Methyl-CpG-binding domain-containing protein 4; TrEMBL-Plants: tr|I3SU39|I3SU39_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0259800 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |