Domain Predictions — View

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cd02336

Source: CDD

Description

ZZ_RSC8

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v3338570.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: SWI/SNF complex subunit SWI3D-like [Cicer arietinum] gi\|502149174\|ref\|XP_004507421.1\|	Domains G3DSA:1.10.10.10 G3DSA:1.10.10.60 IPR000433 IPR001005 IPR007526 IPR009057 IPR011991 IPR017884 IPR032451 PF00249 PF00569 PF04433 PF16495 PS01357 PS50135 PS50934 PS51293 PTHR12802 PTHR12802:SF39 SM00291 SM00717 SSF46689 SSF57850 cd00167 cd02336 mobidb-lite	26
LotjaGi3g1v0507400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex subunit SWI3D; TAIR: AT4G34430.3 DNA-binding family protein; Swiss-Prot: sp\|Q8VY05\|SWI3D_ARATH SWI/SNF complex subunit SWI3D; TrEMBL-Plants: tr\|G7JG42\|G7JG42_MEDTR SWI/SNF complex subunit SWI3D; Found in the gene: LotjaGi3g1v0507400	Domains G3DSA:1.10.10.10 G3DSA:1.10.10.60 G3DSA:3.30.60.90 IPR000433 IPR001005 IPR007526 IPR009057 IPR017884 IPR032451 IPR036388 IPR041984 IPR043145 PF00249 PF00569 PF04433 PF16495 PS01357 PS50135 PS50934 PS51293 PTHR12802 PTHR12802:SF39 SM00291 SM00717 SSF46689 SSF57850 cd00167 cd02336 mobidb-lite	29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00