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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0507400 |
| Transcript ID | LotjaGi3g1v0507400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SWI/SNF complex subunit SWI3D; TAIR: AT4G34430.3 DNA-binding family protein; Swiss-Prot: sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D; TrEMBL-Plants: tr|G7JG42|G7JG42_MEDTR SWI/SNF complex subunit SWI3D; Found in the gene: LotjaGi3g1v0507400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92450979..92458729) extracted from Lotus japonicus Gifu genome v1.2.
ACTTGACTTAAAGGGAGTTTTGAGTTTTGCAGTTTCACCCACACTCATGTTGTGTTCCATCTTATTTCTCATTTTCCTTT TTCTTTTTTTCATCTCTCTTTCTAGAGTGTGGAAATAGAGGGATTGTGATGACGTATATGTAGGAAGCAAACCACAGTTT CAGTGAACAACAACAACACGAACCCTTTCCCTTCTTCTCCTACTCTCGATGGAGGAGAAACGCCGCGAAACCGCATCTCA ACCTCCATCAACCACCGATTCACCGGCATCGGAACCCGTTCCACCACGCCGCCGCGCCGGAGGCAACAAGAGGAAGGCCA GCGCCTCCAATTCCTCTTCCATACCCTCCAAACGCGCCACGCGCGAGAAGGCCTCGCCTATTCACTTTCCTCCTCTCCAC AATGGCCCTCTCACCAGGGCTCGCCAAATCCCTAGCAATCTCTCCTCCGCCGCGGCATCGGAAGGCGGAGGTTTCGCATC TGCTCCCGCTGCTGTGAAACACTCGGAACGCGCATCGCAGGGACAAGGCTTGGGCGGAGAGTCGTCGGCTCTGGCGGAGA TGCTCAAGAAGGAGAGCGAGTGGGAGTCTCTGGAAGCTGCAATTGAAGCTGAATTCGAAGCTATCAGATCTCGTGGTGCC AATGCTCACGTTGTTCCTACTCATTGCGGTGAGATTCTGTGCCTATTATGGAACCCTAATTGGTGTTCCGCGGAATTCAG CTGCGCTGGTGTATCATGAATTATGCCATTTTCTTTATTTCTTTCTAATTTTACAGTTATTCACAATTTATGTAGTTGCT TTTTCCAATTTTCATTGCAGTAGTGTTAGAATTGGTGAAGGAAATTGTGTGTGTTTGTTCTTAATTCTGAATTTTGATTA GTCTAAGGGAACCTGATGTTACATTGCAACACAATTGATGGAAACTGAGACTCATTGCATTCTGTTTTAGGTCTACTCAT AAATTATCTTTTTCATGTTTTTTTTCCCACCTTAATGTTGTAGATTTAGTCGCCCGTTTATTGTTGTTTCGATCCTTTTC TTGAGATTTTGTCTTGATAGTCTTTAGAATGTGTAGGCTTCTGTAGATAATTGTAAAGAAGACAAGTAAGAACTGTATGT ATACTTATTGAGTATTTATGTTTAGTTTATAAGAACTTTCTTAAGTATGAAAAAAGAGAAGGTAATTGTTTTTCCCACCC CCGCTCATCTAGTTACACCTCCCCCCTTTTAAGTGCGTTAACATCGCACTTTCAAGTACGTGAACATCACACTTTCAAGT GCGTGTAAAAAAAGGGAGGTGGAACTAGATGAGAGGGGGGCGGGAATAACAATTACCAAAAGAGAAACCATACTGCATAT TGTGTTGGAGCAGGTATACTGCAAAACCTAAAGGGAATGTTATAAAAATTAATTGCATTTGTTTTTATCATATTGTTGTA AGGATAATGCTTCTGCTATCCAACTATATATTTGTAATTGTAAGACAATTATGCAAATCCCTGGTGACCCCGGTGTCCCT TCGGATCACCCCAAATTTAGAAAAATAATTCATCTGGTTGATTTTCCATTATTTCAATATTTAATTGCAGTAAGCGTATT CAAGTTGACTCAAAGGTCAAAGCTTCGTTCCTGAGTTATCCATTTTATCTTTGAAATTGAATTTCAGGTTGGTTTCATTG GTCTAATATCCATCCGATTGAGAAGCGTATGTTGCCTTCTTTCTTTAATGGCAAAAGTGAAAATCGGACTCCGGATATAT ACATGGAGGTACGAAATTGGATAATGAAGAAATTTCATTCAAATCCAAATGTACAAATTGAATCGAAAGATTTGTCAGAT CTTGATGTTGGAGAATTGGATGCTAGGCAAGAGATAATGGAGTTTCTGGACTATTGGGGTTTAATTAACTTCCACCCATT CCCTTCGACGGGTTCTGCGGTGCCCACCTCCAGTGATGACGGGGAATCAGAAAAGAATTCCTTGCTTGAAAAATTGTATC ACTTTGAAACTCTCCAGTTAAGTCCACCTATTGTTCAAAAGACTAGCCTAATGACTCCAGCTATGACCTCTGGTTTGTTT CCAGAGTCTACAATTTCTGAAGAGTTGGTGAAACAAGAGGGCCCTGCAGTTGAGATGCTTGAGTACCATTGCAACTCTTG TTCCGCTGATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGTTATTTATTTATAACTAAATAAATCATTGTAGTTCG TTATTTAAAGGTTTATTGAAGATTTGGCTTATCTGAAACAGTTGTTTATGGTTTATTGTGTATTACTCAAAATTCTATGC CATCGCAAACCTGGTGTTCTTGTAAAAGCTGTAGCTGTAGTTGGTAGAATTGAACAATTCAATTCAATTTGGCAAGCTAG TGATTAATATTATACGGTTAATCATAGATGACAATGAATTGTGTAGTACATATATAATCAGTGTGATTCCATCTATATGA ACCACATGATTTAACCATTCATTTTTTAATTTTATTTTTTTGTTTCTCTTTCACCAACTCCTGTCAAAGAAATGGTAAAT CTAACATGTTTAAATTGTGAAATGTAAAAATACTGAAAACACACTACTAAACGTACCCTATTAGATTATTCTACTGCTCT GTTTTTTATTTTCTGAACCTGGGACTTCACACTCACTCACTCCATTCACCTTACTTCACTGCTCTATTACTCGATTTTCA TTCTTCTAAAATAGAGGCTTCTCACAGTCACTTGCTCACCCTATCTGCACCTTATTTGACTTTATCCCTTGCAGCATTAT TTCCCTTGTTTGGTGCATTAATAGTTTAGTTCCCTCCATCAGTGAGGAGTTAAGGTGTTTTCACATTTTGCTTCTAGGAA TCTTATTTGGTAACTTTTATTTATGATGTCTCCAAGAAGAAATTACCATTGTGGCTTTATGACAGAATCAGTTACAATCT TATATGAACTAAATTAGATATTTCAAAAGTTTTTTTATTAGTTTGAAGTAACATTTCTGGAGTAGTAGAACAACTGAATT TAATTTGTGAAACGTGTGTACTTCAAATTACACATGAATGCATTCATCAAGAGAGGCCACGTGTTAGCTGATTTAAAAGG TCAATTTCCTTGTTTTTTGTCTGCAATTCAGCTAGTAACAAGCCGGTTAACTATTTCACTGTTGGTTGAATCATCACCAA TTATGTTGTATATTTTATCAACTCTGTTATGTCTACCAGGCAGATTTTGATCTCTGTACGGACTGCTTTAGTAATGGAAG ATTTGGCTCTGGCATGTCTTCGTCAGATTTTATAGTCATGGAACCAGCTGAAGTTGCTGGGGTTAGTGGTGGAAACTGGA CTGATCAGGAGACCCTTCTGCTCCTTGAAGCATTAGAACTTTATAAAGAAAATTGGAATGAAATTGCAGAGCATGTTGGA ACAAAATCAAAAGCTCAGTGCATATTGCACTTTGTTCAAATGCCAATTGAGGATGCCTTTGTTGATTGTGATGATGATGT TGATGCTAGATGCAAAGAAACTGCAGATCCAGCTGCAACAGTCGATGCATCTGTAGACAAAGGTGCTTCAGAAGCTGTGG AAAATGACACTAGTCATAGCAGCAAAGGCCATGATGAAAGTCCTGACACTGAAGATGTTAAAGTTAATCAGGAGGAGACT CCAAAGTTACAAGATGCTACTGATGTGAAAACTAGTGAGGGAACTTCTAAATCAGAAGATGCTGTTAATGTAAAATTTGG TCAAAAAGTAGGCAATGATCGTGCTCTAAATGCTCTTAAGGAAGCATTTGAAGCTGTTGGTTACTCTTCAGAGCCCGTAG GCCCTTCTTCACTTGCTGAAGTGGGTAATCCTGTCATGGCATTGGTAAGTTGAATGCTTTCCTGTATGAATGGTAGCTTG TTTTTTAATCTTTTGAGGTTTGGATACAAGTATCTAGTAAGTTATGTAATGGAAGACTCTTCTCTTCAGAACTATAATCT TGAATTAATTATCATATTTAACTGTAACTGCTGGCGCTGACCCTCTTGCTTGTGCACTGTGTCATGTCTATTGCTTGCAG ATGAGAAACCTTACAAAATTGCTTGTGTTTATTATGCTATCAAATACTCGTGTTTACTAAATTATAGGCAACGTTTTCCT TTCCTTTCATTGTATCATGTCATGCCATCTATATGTTTCACATGTTTTTAGCCTTGTGGATCCCATCTTGCTGATTAATG TCATGTTGCTCTTCTGCAGGCAGCTTTTCTTGCACAATTGGTGGGTTCCGATGTAGCTGTTGCTTCAGCCCATAGCTCCA TAAAATCCATGTCTGGAAATTCTCCTGGAACTGAGCTTGCTGCAAGGTGTTGCTTTATTCTAGAAGATCCACCAGATCAT AAGGAACCAACTTGTTCTGAGAGGTATGTGATTTATATGGAGAGTTTGTTATTAGGCAGTTCCATAGCTATTCCAATTGT TTTTTATTGGGACTTACAATTATGTGTATGATCGTAGGGATTCTGAAAGTAAGGGAGTTCAGGATGACACCAATGAAAAA CAGGATAAACTGATGTCAGATGATAAAGCTTTAGCAAATGATCACAAGGACATGGAAATTGAAATTAACGCTTCAGAAGA CCAGAGACAGCTGAGCTCTACAGATGATGGTGCCTTGAAAGATCCTAGTTCTTCAAAGGAGCAAGCAATGATTGATCATG AGTCTGAGCTTGACAATTGTAATGATCCCACCAATTCAAAGACACCAAATGATAAAGTTCCAGGCACTCTGCAGGATTCA GATGGTTCAACATCCAAGAGTGAAATTCCACCTAATTCAGAGGAGGTTCGGGAGGGAACTTTAACTGAAGAACCTTGCCA TCTTGTGGAGGAACTAAAGGACGGACCTGTGTCTGAATCAAGTCCGTCAGAAAAGAAAGAAGTTCAGCAGTCAATTAAAT CCAATTTACCAGGAGAGCATTCAAAGCCAGTAGATACACCAAAGTCTGCTGAGATGGTTTCTGATTCTATATCTTTAGAT AAGAACCAACCTCAAACCCCATTATCTACAAATCCAGTTCTCGAGTCTGGGAAAATGAAGGACTCTGAAATGGATGTTGA TATTGGTTCTAATTCGTTGCCATCAGAAAAGATTGACTCTCAGCCACCATTTACACCAATATCATCCCAATATAATGGGG CAGAAAAGGATGTAGATATGATATCGTCTTCGCATCCAATTAAATCAAATTCTGGTGCTGAAAATGATGCAACTACAGGT CTCTCTCTCTCTCTCATCCACAAACATACACATAAAAAAGGAATGCAGTAGTTATTCATGTACTAAGAAATGCACTGGAA TAAATAGGGTCTCAGTAATTGAGGAGTCTGTCATTAATTCATTTTACAAATTTAATCCATGAAAATGAATAAAATCTGCG TACAGGGACAGGTGAAGATCATGTGGAAAATGCTACGAAAGTGAAAGATGATGGTGCAAAAACTAATTTGGATAACAATT TTGAAAAATTGAAACGTGCTGCAGTTTCTACACTTGCTGCAGCAGCTGTAAAGGCAAAACTTCTAGCAGATCAGGAAGAA GATGAAATCCGACAACTAACTTCTTCGTTGATAGAAAAGCAGGTAATCTCATGGCCTTGTAAACCTTTTCATTGAATTAT ATGTACATGCTTTGTTCTTCTAACTTTGTTGGTAAATCTATCAACTTGCAGTTGCATAAGTTGGAAACAAAGTTGGCTTT CTTCAATGGTATGGAGAATGTGGTGATGAGGGTGAGGGAGCATTTAGATCGATCACGGCACAAGCTTTATCATGAGCGTG CTCTGATAATTGCATCCCGGCTAGGTTTACCAGCTTCCTCATCCAGAGGTGTACCACCATCTGTACAAACCAATAGAATT CCTATGAATTTTGCAAACTCACTTCCCAGACCTCAAATCGCCATGAATCCCCAAAGACAAATGATATCTAGACCTGTGGG CACTGCGGCTTCGACTCTTCCAAACCCCTTTGCATCTGCAAATCCAGCAGGAAATTCAGTTCGGCCATCCAGCCAGGAAA ATCTTTCTTCTGTTGGGACAAAATAAATGTTGAGTACGCATGAAAAAAGGTTCATGTCTTCTTACTTACCGATCACCTGC CACCATTTTGACAATGTGAGTATGCATCTTCTTTTGGTGGATTAGTCTGTTTTTGTAGAAATTGTACTTATCTGTTCTCT TTTTTCATTATACGTATACACATGCTCTAGATAAGAGTTAAGTTCTTTGTGGCAAAGGAGTACCTTTGTTTTCACTGAGC CGCTAACCTAGTTTATGGTTGGCTAATAGGCAAATAAAAAATCTGATGTGACTTCCATCTTTATTTATTTTACATATATA TATATATTGATGAAAATTGTTTGGTTGCCCTTATATAATGCCAAATAGTACTGATCAGTGTTGTGAAATAATTTGCTCCC CAAATTGCTTATTTGTTTCCTTCACTTAACTGTATCATTATTTCAACAATTAAAATGGACAATGAGGACCCGATTGAGAA CAATTATATATTTTGTATAAGAACCCGAGTTGAAAATGAGTGACATGGGCAGGGACTAAAAGTGAAGTTGGATACTTGTT AGAAATGGGAAAATAACACTTCCTGAAGTAGTAGTAGTAGTAGTAGCACTAGCTACTACTTCACAGCTTCAACAAAAAAT GTCCGGGATGTGTTATTGTCTCATTTTCATAGTTCCTAACGAGTGTCCAAACGAGCATAAAAGTATATTCCTAGTTTAAA TGCTTGTTTCTAGTCTTACTAGATCTTGTTATATAATAGCTTGCAGTATTAATCTGTGGTTATTGTTTGATCCAGAAAAT TCTTTTGAAGATCATCAAGTGCTGTTTAGGACTAACTCGAAATTGACAACTATTTGGAATTCAGTGGCCAGAAGCCCAGA ATAGTGCCAGAGATGTGAGGATGGAAGTTTAGTAATATATTTAAAGTTGTAGAGCGGTTGCAGTTGTTTAAAATTTTGAG GTGTTTAACTTAAAACAAGTGGATAGTTGTTCAATCTTGTAACTCAATACTATTCACTACTTCATATTGAAATGTGGATG GCTTTTTATAAAAGGATATATAGCTATTACTAGTGCTTTGTTTGGATCTGACAAGAAGTGGGAAGGAAATATGTAGGAGA CGAGAATTTGAGTAGAAAGTGATTTGATTTTCAAGTTGTTTGGAGAGAGAGAAAAAAAAGAATGAAGGAGGAAAGGGTAT TTGATACATAGAGGTATTTATCCATGTATGAAATATTACTTACATCCCATTTGGTTTGATGTTTATTTTGGCTTATTTTG ATTGTTATTTCACAATACTAACGAACAATTAGATGGTTTTGGGTTAAATCTGTTCTAATCTCATGTGAAATACGCATCAT TTGATTTTAGTCTATGACTTTAATATATATATTTATCATTTTGATCATTCATTTTTTTGTCAAGGTCATTCATTTTCCGA AACAATTCATTTTAAACCTTGAGATCAATAAAATAAGAGTGATACCATGTCATATTTTTTTGAACTCCCACACACCTCAT TTGTCTATTTTCGAACTAGTCAAATATGTCTTCCACTTATTAAAACTGTGTCGAGTTTTTTAAAAAATAGACCAATGATA TTAAGTGGATGTGAGTGTGTTCAGAATGGTATAACTTACATTTTTTGTGTGGATTAAATTTTATTTTAAAC
CDS sequence (LotjaGi3g1v0507400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGAAACGCCGCGAAACCGCATCTCAACCTCCATCAACCACCGATTCACCGGCATCGGAACCCGTTCCACCACG CCGCCGCGCCGGAGGCAACAAGAGGAAGGCCAGCGCCTCCAATTCCTCTTCCATACCCTCCAAACGCGCCACGCGCGAGA AGGCCTCGCCTATTCACTTTCCTCCTCTCCACAATGGCCCTCTCACCAGGGCTCGCCAAATCCCTAGCAATCTCTCCTCC GCCGCGGCATCGGAAGGCGGAGGTTTCGCATCTGCTCCCGCTGCTGTGAAACACTCGGAACGCGCATCGCAGGGACAAGG CTTGGGCGGAGAGTCGTCGGCTCTGGCGGAGATGCTCAAGAAGGAGAGCGAGTGGGAGTCTCTGGAAGCTGCAATTGAAG CTGAATTCGAAGCTATCAGATCTCGTGGTGCCAATGCTCACGTTGTTCCTACTCATTGCGGTTGGTTTCATTGGTCTAAT ATCCATCCGATTGAGAAGCGTATGTTGCCTTCTTTCTTTAATGGCAAAAGTGAAAATCGGACTCCGGATATATACATGGA GGTACGAAATTGGATAATGAAGAAATTTCATTCAAATCCAAATGTACAAATTGAATCGAAAGATTTGTCAGATCTTGATG TTGGAGAATTGGATGCTAGGCAAGAGATAATGGAGTTTCTGGACTATTGGGGTTTAATTAACTTCCACCCATTCCCTTCG ACGGGTTCTGCGGTGCCCACCTCCAGTGATGACGGGGAATCAGAAAAGAATTCCTTGCTTGAAAAATTGTATCACTTTGA AACTCTCCAGTTAAGTCCACCTATTGTTCAAAAGACTAGCCTAATGACTCCAGCTATGACCTCTGGTTTGTTTCCAGAGT CTACAATTTCTGAAGAGTTGGTGAAACAAGAGGGCCCTGCAGTTGAGATGCTTGAGTACCATTGCAACTCTTGTTCCGCT GATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGCAGATTTTGATCTCTGTACGGACTGCTTTAGTAATGGAAGATT TGGCTCTGGCATGTCTTCGTCAGATTTTATAGTCATGGAACCAGCTGAAGTTGCTGGGGTTAGTGGTGGAAACTGGACTG ATCAGGAGACCCTTCTGCTCCTTGAAGCATTAGAACTTTATAAAGAAAATTGGAATGAAATTGCAGAGCATGTTGGAACA AAATCAAAAGCTCAGTGCATATTGCACTTTGTTCAAATGCCAATTGAGGATGCCTTTGTTGATTGTGATGATGATGTTGA TGCTAGATGCAAAGAAACTGCAGATCCAGCTGCAACAGTCGATGCATCTGTAGACAAAGGTGCTTCAGAAGCTGTGGAAA ATGACACTAGTCATAGCAGCAAAGGCCATGATGAAAGTCCTGACACTGAAGATGTTAAAGTTAATCAGGAGGAGACTCCA AAGTTACAAGATGCTACTGATGTGAAAACTAGTGAGGGAACTTCTAAATCAGAAGATGCTGTTAATGTAAAATTTGGTCA AAAAGTAGGCAATGATCGTGCTCTAAATGCTCTTAAGGAAGCATTTGAAGCTGTTGGTTACTCTTCAGAGCCCGTAGGCC CTTCTTCACTTGCTGAAGTGGGTAATCCTGTCATGGCATTGGCAGCTTTTCTTGCACAATTGGTGGGTTCCGATGTAGCT GTTGCTTCAGCCCATAGCTCCATAAAATCCATGTCTGGAAATTCTCCTGGAACTGAGCTTGCTGCAAGGTGTTGCTTTAT TCTAGAAGATCCACCAGATCATAAGGAACCAACTTGTTCTGAGAGGGATTCTGAAAGTAAGGGAGTTCAGGATGACACCA ATGAAAAACAGGATAAACTGATGTCAGATGATAAAGCTTTAGCAAATGATCACAAGGACATGGAAATTGAAATTAACGCT TCAGAAGACCAGAGACAGCTGAGCTCTACAGATGATGGTGCCTTGAAAGATCCTAGTTCTTCAAAGGAGCAAGCAATGAT TGATCATGAGTCTGAGCTTGACAATTGTAATGATCCCACCAATTCAAAGACACCAAATGATAAAGTTCCAGGCACTCTGC AGGATTCAGATGGTTCAACATCCAAGAGTGAAATTCCACCTAATTCAGAGGAGGTTCGGGAGGGAACTTTAACTGAAGAA CCTTGCCATCTTGTGGAGGAACTAAAGGACGGACCTGTGTCTGAATCAAGTCCGTCAGAAAAGAAAGAAGTTCAGCAGTC AATTAAATCCAATTTACCAGGAGAGCATTCAAAGCCAGTAGATACACCAAAGTCTGCTGAGATGGTTTCTGATTCTATAT CTTTAGATAAGAACCAACCTCAAACCCCATTATCTACAAATCCAGTTCTCGAGTCTGGGAAAATGAAGGACTCTGAAATG GATGTTGATATTGGTTCTAATTCGTTGCCATCAGAAAAGATTGACTCTCAGCCACCATTTACACCAATATCATCCCAATA TAATGGGGCAGAAAAGGATGTAGATATGATATCGTCTTCGCATCCAATTAAATCAAATTCTGGTGCTGAAAATGATGCAA CTACAGGGACAGGTGAAGATCATGTGGAAAATGCTACGAAAGTGAAAGATGATGGTGCAAAAACTAATTTGGATAACAAT TTTGAAAAATTGAAACGTGCTGCAGTTTCTACACTTGCTGCAGCAGCTGTAAAGGCAAAACTTCTAGCAGATCAGGAAGA AGATGAAATCCGACAACTAACTTCTTCGTTGATAGAAAAGCAGTTGCATAAGTTGGAAACAAAGTTGGCTTTCTTCAATG GTATGGAGAATGTGGTGATGAGGGTGAGGGAGCATTTAGATCGATCACGGCACAAGCTTTATCATGAGCGTGCTCTGATA ATTGCATCCCGGCTAGGTTTACCAGCTTCCTCATCCAGAGGTGTACCACCATCTGTACAAACCAATAGAATTCCTATGAA TTTTGCAAACTCACTTCCCAGACCTCAAATCGCCATGAATCCCCAAAGACAAATGATATCTAGACCTGTGGGCACTGCGG CTTCGACTCTTCCAAACCCCTTTGCATCTGCAAATCCAGCAGGAAATTCAGTTCGGCCATCCAGCCAGGAAAATCTTTCT TCTGTTGGGACAAAATAA
Protein sequence (LotjaGi3g1v0507400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEKRRETASQPPSTTDSPASEPVPPRRRAGGNKRKASASNSSSIPSKRATREKASPIHFPPLHNGPLTRARQIPSNLSS AAASEGGGFASAPAAVKHSERASQGQGLGGESSALAEMLKKESEWESLEAAIEAEFEAIRSRGANAHVVPTHCGWFHWSN IHPIEKRMLPSFFNGKSENRTPDIYMEVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWGLINFHPFPS TGSAVPTSSDDGESEKNSLLEKLYHFETLQLSPPIVQKTSLMTPAMTSGLFPESTISEELVKQEGPAVEMLEYHCNSCSA DCSRKRYHCQKQADFDLCTDCFSNGRFGSGMSSSDFIVMEPAEVAGVSGGNWTDQETLLLLEALELYKENWNEIAEHVGT KSKAQCILHFVQMPIEDAFVDCDDDVDARCKETADPAATVDASVDKGASEAVENDTSHSSKGHDESPDTEDVKVNQEETP KLQDATDVKTSEGTSKSEDAVNVKFGQKVGNDRALNALKEAFEAVGYSSEPVGPSSLAEVGNPVMALAAFLAQLVGSDVA VASAHSSIKSMSGNSPGTELAARCCFILEDPPDHKEPTCSERDSESKGVQDDTNEKQDKLMSDDKALANDHKDMEIEINA SEDQRQLSSTDDGALKDPSSSKEQAMIDHESELDNCNDPTNSKTPNDKVPGTLQDSDGSTSKSEIPPNSEEVREGTLTEE PCHLVEELKDGPVSESSPSEKKEVQQSIKSNLPGEHSKPVDTPKSAEMVSDSISLDKNQPQTPLSTNPVLESGKMKDSEM DVDIGSNSLPSEKIDSQPPFTPISSQYNGAEKDVDMISSSHPIKSNSGAENDATTGTGEDHVENATKVKDDGAKTNLDNN FEKLKRAAVSTLAAAAVKAKLLADQEEDEIRQLTSSLIEKQLHKLETKLAFFNGMENVVMRVREHLDRSRHKLYHERALI IASRLGLPASSSRGVPPSVQTNRIPMNFANSLPRPQIAMNPQRQMISRPVGTAASTLPNPFASANPAGNSVRPSSQENLS SVGTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1040 | 1040 | 0.0 | – | |
| MobiDBLite | 1 | 110 | 110 | - | – | |
| PANTHER | 1 | 1040 | 1040 | 0.0 | – | |
| MobiDBLite | 35 | 50 | 16 | - | – | |
| MobiDBLite | 70 | 84 | 15 | - | – | |
| ProSiteProfiles | 147 | 244 | 98 | 20.678 | ||
| Pfam | 150 | 235 | 86 | 8.6E-21 | ||
| Gene3D | 153 | 238 | 86 | 7.4E-25 | ||
| SUPERFAMILY | 154 | 236 | 83 | 5.97E-23 | ||
| SUPERFAMILY | 307 | 368 | 62 | 1.07E-11 | – | |
| SMART | 309 | 353 | 45 | 8.8E-9 | ||
| ProSiteProfiles | 309 | 355 | 47 | 9.114 | ||
| Gene3D | 309 | 356 | 48 | 6.5E-8 | ||
| Pfam | 312 | 348 | 37 | 3.8E-9 | ||
| CDD | 313 | 357 | 45 | 4.18089E-23 | ||
| ProSitePatterns | 315 | 341 | 27 | - | ||
| ProSiteProfiles | 367 | 418 | 52 | 22.982 | ||
| SUPERFAMILY | 367 | 419 | 53 | 1.05E-12 | ||
| Gene3D | 368 | 418 | 51 | 2.0E-24 | – | |
| SMART | 368 | 416 | 49 | 1.3E-12 | ||
| Pfam | 370 | 412 | 43 | 2.3E-12 | ||
| CDD | 388 | 413 | 26 | 3.43323E-4 | ||
| MobiDBLite | 434 | 497 | 64 | - | – | |
| MobiDBLite | 456 | 485 | 30 | - | – | |
| MobiDBLite | 592 | 623 | 32 | - | – | |
| MobiDBLite | 639 | 859 | 221 | - | – | |
| MobiDBLite | 641 | 655 | 15 | - | – | |
| MobiDBLite | 656 | 676 | 21 | - | – | |
| MobiDBLite | 677 | 706 | 30 | - | – | |
| MobiDBLite | 707 | 737 | 31 | - | – | |
| MobiDBLite | 738 | 753 | 16 | - | – | |
| MobiDBLite | 767 | 792 | 26 | - | – | |
| MobiDBLite | 809 | 859 | 51 | - | – | |
| Pfam | 891 | 967 | 77 | 6.6E-24 | ||
| MobiDBLite | 1010 | 1045 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0507400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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