Domain Predictions — View

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cd03263

Source: CDD

Description

ABC_subfamily_A

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0033249.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi\|502126773\|ref\|XP_004499431.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	18
Lj1g3v4241080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter A family member 1-like [Glycine max] gi\|356504779\|ref\|XP_003521172.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	18
Lj1g3v4241080.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter A family member 1-like [Glycine max] gi\|356504779\|ref\|XP_003521172.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF36 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
Lj4g3v1617880.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi\|502126775\|ref\|XP_004499432.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS50893 PTHR19229 PTHR19229:SF127 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	17
Lj4g3v1617880.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ABC transporter A family member 7-like isoform X1 [Cicer arietinum] gi\|502126775\|ref\|XP_004499432.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS50893 PTHR19229 PTHR19229:SF127 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	17
LotjaGi1g1v0216300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT3G47730.1 ATP-binding cassette A2; Swiss-Prot: sp\|Q84K47\|AB2A_ARATH ABC transporter A family member 2; TrEMBL-Plants: tr\|I1KCQ5\|I1KCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0216300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF205 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263 mobidb-lite	20
LotjaGi1g1v0216500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|A0A0B2RFY8\|A0A0B2RFY8_GLYSO ABC transporter A family member 7; Found in the gene: LotjaGi1g1v0216500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF222 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
LotjaGi1g1v0672100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp\|Q84M24\|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr\|G7KTH7\|G7KTH7_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF36 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
LotjaGi1g1v0672100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp\|Q84M24\|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr\|G7KTH7\|G7KTH7_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF36 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	23
LotjaGi1g1v0672100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC(ATP-binding) family transporter; TAIR: AT2G41700.1 ATP-binding cassette A1; Swiss-Prot: sp\|Q84M24\|AB1A_ARATH ABC transporter A family member 1; TrEMBL-Plants: tr\|A0A072U3A4\|A0A072U3A4_MEDTR ABC transporter family protein; Found in the gene: LotjaGi1g1v0672100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF36 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	23
LotjaGi4g1v0247900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|A0A0B2SVW7\|A0A0B2SVW7_GLYSO ABC transporter A family member 7; Found in the gene: LotjaGi4g1v0247900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF222 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
LotjaGi4g1v0247900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|A0A072UQI5\|A0A072UQI5_MEDTR ABC transporter A family protein; Found in the gene: LotjaGi4g1v0247900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PS00211 PS50893 PTHR19229 PTHR19229:SF204 SM00382 SSF52540 TRANSMEMBRANE cd03263	17
LotjaGi4g1v0248000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|K7KVX1\|K7KVX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0248000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF222 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
LotjaGi4g1v0248000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|A0A151R0Y3\|A0A151R0Y3_CAJCA ABC transporter A family member 7; Found in the gene: LotjaGi4g1v0248000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF222 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19
LotjaGi4g1v0248000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter subfamily A member; TAIR: AT3G47780.1 ABC2 homolog 6; Swiss-Prot: sp\|Q9STT5\|AB7A_ARATH ABC transporter A family member 7; TrEMBL-Plants: tr\|K7KVX1\|K7KVX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0248000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR003439 IPR003593 IPR017871 IPR026082 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF12698 PS00211 PS50893 PTHR19229 PTHR19229:SF222 SM00382 SSF52540 TMhelix TRANSMEMBRANE cd03263	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03263	CDD	1	6.67