Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd04731

Source: CDD

Description

HisF

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0000105 View details of GO:0000105 AmiGO InterPro QuickGO	Biological process	Histidine biosynthetic process	The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.	Subterm of GO:0006547 GO:0009073 GO:0018130 GO:1901607
GO:0000107 View details of GO:0000107 AmiGO InterPro QuickGO	Molecular function	Imidazoleglycerol-phosphate synthase activity	Catalysis of the reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + aminoimidazole carboxamide ribonucleotide + L-glutamate + 2 H(+).	Subterm of GO:0016763

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0058939.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Glycine max] gi\|356567431\|ref\|XP_003551923.1\|	Domains G3DSA:3.20.20.70 G3DSA:3.40.50.880 IPR004651 IPR006062 IPR010139 IPR011060 IPR013785 IPR014640 IPR017926 IPR029062 MF_00278 PF00117 PF00977 PIRSF036936 PS51273 PTHR21235 PTHR21235:SF2 SSF51366 SSF52317 TIGR00735 TIGR01855 cd01748 cd04731	23
Lj0g3v0058939.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Glycine max] gi\|356567431\|ref\|XP_003551923.1\|	Domains G3DSA:3.20.20.70 G3DSA:3.40.50.880 IPR004651 IPR006062 IPR010139 IPR011060 IPR013785 IPR014640 IPR017926 IPR029062 MF_00278 PF00117 PF00977 PIRSF036936 PS51273 PTHR21235 PTHR21235:SF2 SSF51366 SSF52317 TIGR00735 TIGR01855 cd01748 cd04731	23
LotjaGi4g1v0002000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Imidazole glycerol phosphate synthase subunit HisF; TAIR: AT4G26900.1 HIS HF; Swiss-Prot: sp\|Q9SZ30\|HIS4_ARATH Imidazole glycerol phosphate synthase hisHF, chloroplastic; TrEMBL-Plants: tr\|I1N0Y1\|I1N0Y1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002000	Domains G3DSA:3.20.20.70 G3DSA:3.40.50.880 IPR004651 IPR006062 IPR010139 IPR011060 IPR013785 IPR014640 IPR017926 IPR029062 MF_00278 PF00117 PF00977 PIRSF036936 PS51273 PTHR21235 SSF51366 SSF52317 TIGR00735 TIGR01855 cd01748 cd04731	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd04731	CDD	1	33.33