Domain Predictions — View

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cd05789

Source: CDD

Description

S1_Rrp4

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4407610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: exosome complex component rrp4-like [Cicer arietinum] gi\|502115055\|ref\|XP_004495115.1\|	Domains Coil IPR004088 IPR012340 IPR026699 PF15985 PTHR21321 PTHR21321:SF4 SSF110324 SSF50249 SSF54791 cd05789 mobidb-lite	12
LotjaGi1g1v0731200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Exosome complex component RRP4; TAIR: AT1G03360.1 ribosomal RNA processing 4; Swiss-Prot: sp\|Q9ZVT7\|RRP4_ARATH Exosome complex component RRP4 homolog; TrEMBL-Plants: tr\|B7FL19\|B7FL19_MEDTR Ribosomal RNA processing protein; Found in the gene: LotjaGi1g1v0731200	Domains Coil G3DSA:2.40.50.100 G3DSA:2.40.50.140 IPR004088 IPR012340 IPR026699 IPR036612 PF15985 PTHR21321 PTHR21321:SF4 SSF110324 SSF50249 SSF54791 cd05789 mobidb-lite	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00