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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exosome (RNase complex) | A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: exosome complex component rrp4-like [Cicer arietinum] gi|502115055|ref|XP_004495115.1| | 12 | ||
| – | Exosome complex component RRP4; TAIR: AT1G03360.1 ribosomal RNA processing 4; Swiss-Prot: sp|Q9ZVT7|RRP4_ARATH Exosome complex component RRP4 homolog; TrEMBL-Plants: tr|B7FL19|B7FL19_MEDTR Ribosomal RNA processing protein; Found in the gene: LotjaGi1g1v0731200 | 15 | ||
| – | Exosome complex component RRP4; TAIR: AT1G03360.1 ribosomal RNA processing 4; Swiss-Prot: sp|Q9ZVT7|RRP4_ARATH Exosome complex component RRP4 homolog; TrEMBL-Plants: tr|B7FL19|B7FL19_MEDTR Ribosomal RNA processing protein; Found in the gene: LotjaGi1g1v0731200 | 9 | ||
| – | Exosome complex component Rrp4; TAIR: AT2G25355.1 PNAS-3-like protein; Swiss-Prot: sp|Q7KWX9|EXOS3_DICDI Putative exosome complex component rrp40; TrEMBL-Plants: tr|I1JE93|I1JE93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0298600 | 15 | ||
| – | Exosome complex component Rrp4; TAIR: AT2G25355.1 PNAS-3-like protein; Swiss-Prot: sp|Q7KWX9|EXOS3_DICDI Putative exosome complex component rrp40; TrEMBL-Plants: tr|I1JE93|I1JE93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0298600 | 15 | ||
| – | Exosome complex component RRP40; TAIR: AT4G32175.1 PNAS-3-like protein; Swiss-Prot: sp|Q7KWX9|EXOS3_DICDI Putative exosome complex component rrp40; TrEMBL-Plants: tr|C6T951|C6T951_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0298600 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd05790 | CDD | 1 | 16.67 |