Domain Predictions — View

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cd05833

Source: CDD

Description

Ribosomal_P2

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0062259.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S acidic ribosomal protein P2-4-like [Cicer arietinum] gi\|502122169\|ref\|XP_004497613.1\|	Domains IPR027534 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	11
Lj1g3v4703000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis sativus] gi\|449521190\|ref\|XP_004167613.1\|	Domains IPR027534 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	11
Lj2g3v1196740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S acidic ribosomal protein P2B-like [Cicer arietinum] gi\|502083624\|ref\|XP_004487515.1\|	Domains IPR027534 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF48 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	12
Lj3g3v1145920.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S acidic ribosomal protein P2B-like [Cicer arietinum] gi\|502083624\|ref\|XP_004487515.1\|	Domains IPR027534 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF48 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	12
LotjaGi1g1v0678000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein P2; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|O24415\|RLA2B_MAIZE 60S acidic ribosomal protein P2B; TrEMBL-Plants: tr\|I3T179\|I3T179_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0678000	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF87 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14
LotjaGi2g1v0286700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|Q9LXM8\|RLA24_ARATH 60S acidic ribosomal protein P2-4; TrEMBL-Plants: tr\|I3SKJ7\|I3SKJ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0286700	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF89 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14
LotjaGi2g1v0286700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|Q9LXM8\|RLA24_ARATH 60S acidic ribosomal protein P2-4; TrEMBL-Plants: tr\|I3SKJ7\|I3SKJ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0286700	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF89 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14
LotjaGi2g1v0425400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|O24415\|RLA2B_MAIZE 60S acidic ribosomal protein P2B; TrEMBL-Plants: tr\|I3SVC6\|I3SVC6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0425400	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF90 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14
LotjaGi3g1v0174800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|O24415\|RLA2B_MAIZE 60S acidic ribosomal protein P2B; TrEMBL-Plants: tr\|A0A072VLF0\|A0A072VLF0_MEDTR 60S acidic ribosomal protein; Found in the gene: LotjaGi3g1v0174800	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF89 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14
LotjaGi5g1v0093000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S acidic ribosomal protein; TAIR: AT3G44590.1 60S acidic ribosomal protein family; Swiss-Prot: sp\|O24415\|RLA2B_MAIZE 60S acidic ribosomal protein P2B; TrEMBL-Plants: tr\|I3SVC6\|I3SVC6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0093000	Domains G3DSA:1.10.10.1410 IPR027534 IPR038716 MF_01478 NON_CYTOPLASMIC_DOMAIN PF00428 PTHR21141 PTHR21141:SF90 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION cd05833 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	10.00