Domain Predictions — View

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cd09869

Source: CDD

Description

PIN_GEN1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0469700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT1G01880.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q64MA3\|GENL1_ORYSJ Flap endonuclease GEN-like 1; TrEMBL-Plants: tr\|A2Q3P8\|A2Q3P8_MEDTR Flap endonuclease GEN-like protein; Found in the gene: LotjaGi1g1v0469700	Domains G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR006086 IPR029060 IPR036279 PF00752 PF00867 PR00853 PTHR11081 PTHR11081:SF54 SM00484 SM00485 SSF47807 SSF88723 cd09869 mobidb-lite	17
LotjaGi2g1v0144600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT3G48900.2 single-stranded DNA endonuclease family protein; Swiss-Prot: sp\|Q9M2Z3\|GENL2_ARATH Flap endonuclease GEN-like 2; TrEMBL-Plants: tr\|K7MIH1\|K7MIH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144600	Domains Coil G3DSA:2.40.50.40 G3DSA:3.40.50.1010 IPR000953 IPR006084 IPR006085 IPR006086 IPR016197 IPR029060 IPR036279 PF00752 PF00867 PR00853 PS50013 PTHR11081 PTHR11081:SF57 SM00298 SM00484 SM00485 SSF47807 SSF54160 SSF88723 cd00024 cd09869	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd09869	CDD	1	50.00